Hb_000265_100

Information

Type -
Description -
Location Contig265: 120166-129731
Sequence    

Annotation

kegg
ID rcu:RCOM_1211430
description hypothetical protein
nr
ID XP_012083996.1
description PREDICTED: uncharacterized protein LOC105643473 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L9S2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15027 PE=4 SV=1
Gene Ontology
ID GO:0006275
description portal 56

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_27690: 119960-120205 , PASA_asmbl_27691: 120938-121377 , PASA_asmbl_27692: 121822-122205 , PASA_asmbl_27693: 122959-123929 , PASA_asmbl_27694: 124813-125017 , PASA_asmbl_27695: 126206-129175
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000265_100 0.0 - - PREDICTED: uncharacterized protein LOC105643473 [Jatropha curcas]
2 Hb_000028_530 0.0800848998 - - Protein regulator of cytokinesis, putative [Ricinus communis]
3 Hb_000334_120 0.0990365306 - - PREDICTED: DNA topoisomerase 2 [Jatropha curcas]
4 Hb_010705_040 0.0994270303 - - PREDICTED: kinesin-4 [Jatropha curcas]
5 Hb_002374_090 0.1097362646 - - PREDICTED: cyclin-A1-1 [Jatropha curcas]
6 Hb_004963_020 0.1105064008 - - PREDICTED: patellin-4 [Populus euphratica]
7 Hb_002473_030 0.1129947967 - - PREDICTED: osmotic avoidance abnormal protein 3 [Jatropha curcas]
8 Hb_002232_310 0.1137134214 - - PREDICTED: uncharacterized protein LOC105635987 [Jatropha curcas]
9 Hb_004102_090 0.1157538672 transcription factor TF Family: CPP hypothetical protein JCGZ_06186 [Jatropha curcas]
10 Hb_033041_010 0.1166251689 - - PREDICTED: phragmoplast orienting kinesin 2-like [Populus euphratica]
11 Hb_001864_040 0.1177594827 - - PREDICTED: kinesin-1 [Jatropha curcas]
12 Hb_000032_080 0.1186595857 transcription factor TF Family: HMG transcription factor, putative [Ricinus communis]
13 Hb_001969_120 0.118875754 - - PREDICTED: plectin [Jatropha curcas]
14 Hb_003777_260 0.1192821926 - - PREDICTED: uncharacterized protein LOC105640927 isoform X4 [Jatropha curcas]
15 Hb_006520_030 0.1194817688 - - PREDICTED: osmotic avoidance abnormal protein 3 [Jatropha curcas]
16 Hb_001761_010 0.1201165304 - - PREDICTED: uncharacterized protein LOC105639282 [Jatropha curcas]
17 Hb_000664_080 0.1202279611 - - PREDICTED: NADP-dependent malic enzyme isoform X2 [Jatropha curcas]
18 Hb_004459_030 0.1204357104 - - PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]
19 Hb_004635_020 0.1204406218 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]
20 Hb_000316_070 0.1207341386 - - PREDICTED: actin-1-like isoform X2 [Cucumis melo]

Gene co-expression network

sample Hb_000265_100 Hb_000265_100 Hb_000028_530 Hb_000028_530 Hb_000265_100--Hb_000028_530 Hb_000334_120 Hb_000334_120 Hb_000265_100--Hb_000334_120 Hb_010705_040 Hb_010705_040 Hb_000265_100--Hb_010705_040 Hb_002374_090 Hb_002374_090 Hb_000265_100--Hb_002374_090 Hb_004963_020 Hb_004963_020 Hb_000265_100--Hb_004963_020 Hb_002473_030 Hb_002473_030 Hb_000265_100--Hb_002473_030 Hb_000028_530--Hb_000334_120 Hb_000028_530--Hb_002374_090 Hb_000189_350 Hb_000189_350 Hb_000028_530--Hb_000189_350 Hb_033041_010 Hb_033041_010 Hb_000028_530--Hb_033041_010 Hb_000028_530--Hb_004963_020 Hb_000334_120--Hb_033041_010 Hb_001584_360 Hb_001584_360 Hb_000334_120--Hb_001584_360 Hb_000334_120--Hb_000189_350 Hb_005276_090 Hb_005276_090 Hb_000334_120--Hb_005276_090 Hb_000364_140 Hb_000364_140 Hb_010705_040--Hb_000364_140 Hb_000441_210 Hb_000441_210 Hb_010705_040--Hb_000441_210 Hb_010705_040--Hb_004963_020 Hb_004102_090 Hb_004102_090 Hb_010705_040--Hb_004102_090 Hb_002205_180 Hb_002205_180 Hb_010705_040--Hb_002205_180 Hb_011849_010 Hb_011849_010 Hb_002374_090--Hb_011849_010 Hb_000614_200 Hb_000614_200 Hb_002374_090--Hb_000614_200 Hb_119044_040 Hb_119044_040 Hb_002374_090--Hb_119044_040 Hb_003776_050 Hb_003776_050 Hb_002374_090--Hb_003776_050 Hb_000038_070 Hb_000038_070 Hb_002374_090--Hb_000038_070 Hb_000316_070 Hb_000316_070 Hb_002374_090--Hb_000316_070 Hb_004963_020--Hb_002473_030 Hb_004963_020--Hb_000316_070 Hb_001168_030 Hb_001168_030 Hb_004963_020--Hb_001168_030 Hb_001864_040 Hb_001864_040 Hb_004963_020--Hb_001864_040 Hb_002837_030 Hb_002837_030 Hb_004963_020--Hb_002837_030 Hb_005649_050 Hb_005649_050 Hb_004963_020--Hb_005649_050 Hb_002473_030--Hb_005649_050 Hb_004032_390 Hb_004032_390 Hb_002473_030--Hb_004032_390 Hb_001220_020 Hb_001220_020 Hb_002473_030--Hb_001220_020 Hb_002473_030--Hb_002837_030 Hb_003398_050 Hb_003398_050 Hb_002473_030--Hb_003398_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.048349 0.144108 7.59245 2.10071 0.0786742 0.12534
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0122486 0.0289172 0.0739365 0.664652 0.577394

CAGE analysis