Hb_000270_010

Information

Type -
Description -
Location Contig270: 14962-15491
Sequence    

Annotation

kegg
ID rcu:RCOM_0937130
description hypothetical protein
nr
ID XP_002519075.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RZA6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0937130 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000270_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_017417_020 0.0902395816 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
3 Hb_000431_180 0.1008987741 - - PREDICTED: peroxidase 55 [Jatropha curcas]
4 Hb_069232_010 0.111501122 - - PREDICTED: 60S ribosomal protein L37-3-like [Vitis vinifera]
5 Hb_001691_190 0.1211847967 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001131_100 0.1257788985 - - PREDICTED: uncharacterized protein LOC105638386 [Jatropha curcas]
7 Hb_011928_030 0.1296080453 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
8 Hb_000703_320 0.1345665504 - - receptor-kinase, putative [Ricinus communis]
9 Hb_000331_690 0.1359500019 - - PREDICTED: F-box/WD repeat-containing protein 11-like [Jatropha curcas]
10 Hb_005147_020 0.1460979651 - - PREDICTED: uncharacterized protein LOC105629671 [Jatropha curcas]
11 Hb_005380_030 0.1489531346 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 isoform X2 [Jatropha curcas]
12 Hb_000170_230 0.1515598688 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
13 Hb_133646_010 0.15301654 - - hypothetical protein RCOM_1044030 [Ricinus communis]
14 Hb_081448_010 0.1561928236 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
15 Hb_000128_010 0.1587957273 - - dimethylaniline monooxygenase, putative [Ricinus communis]
16 Hb_176149_010 0.1638952331 - - hypothetical protein JCGZ_16793 [Jatropha curcas]
17 Hb_002248_090 0.1688281823 - - metallothionein 3-like protein [Hevea brasiliensis]
18 Hb_004089_010 0.171200108 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
19 Hb_004586_380 0.1712979134 - - purine transporter, putative [Ricinus communis]
20 Hb_004098_010 0.1728391271 - - -

Gene co-expression network

sample Hb_000270_010 Hb_000270_010 Hb_017417_020 Hb_017417_020 Hb_000270_010--Hb_017417_020 Hb_000431_180 Hb_000431_180 Hb_000270_010--Hb_000431_180 Hb_069232_010 Hb_069232_010 Hb_000270_010--Hb_069232_010 Hb_001691_190 Hb_001691_190 Hb_000270_010--Hb_001691_190 Hb_001131_100 Hb_001131_100 Hb_000270_010--Hb_001131_100 Hb_011928_030 Hb_011928_030 Hb_000270_010--Hb_011928_030 Hb_017417_020--Hb_069232_010 Hb_000331_690 Hb_000331_690 Hb_017417_020--Hb_000331_690 Hb_081448_010 Hb_081448_010 Hb_017417_020--Hb_081448_010 Hb_000128_010 Hb_000128_010 Hb_017417_020--Hb_000128_010 Hb_017417_020--Hb_000431_180 Hb_000703_320 Hb_000703_320 Hb_000431_180--Hb_000703_320 Hb_005147_020 Hb_005147_020 Hb_000431_180--Hb_005147_020 Hb_131591_010 Hb_131591_010 Hb_000431_180--Hb_131591_010 Hb_017661_020 Hb_017661_020 Hb_000431_180--Hb_017661_020 Hb_000431_180--Hb_069232_010 Hb_069232_010--Hb_081448_010 Hb_069232_010--Hb_000703_320 Hb_069232_010--Hb_000331_690 Hb_005203_010 Hb_005203_010 Hb_069232_010--Hb_005203_010 Hb_000170_230 Hb_000170_230 Hb_001691_190--Hb_000170_230 Hb_001691_190--Hb_131591_010 Hb_029866_140 Hb_029866_140 Hb_001691_190--Hb_029866_140 Hb_004586_380 Hb_004586_380 Hb_001691_190--Hb_004586_380 Hb_133646_010 Hb_133646_010 Hb_001691_190--Hb_133646_010 Hb_004089_010 Hb_004089_010 Hb_001131_100--Hb_004089_010 Hb_001131_100--Hb_000331_690 Hb_001131_100--Hb_011928_030 Hb_004195_030 Hb_004195_030 Hb_001131_100--Hb_004195_030 Hb_001131_100--Hb_133646_010 Hb_000347_370 Hb_000347_370 Hb_011928_030--Hb_000347_370 Hb_002248_090 Hb_002248_090 Hb_011928_030--Hb_002248_090 Hb_024857_010 Hb_024857_010 Hb_011928_030--Hb_024857_010 Hb_011928_030--Hb_001691_190 Hb_004267_070 Hb_004267_070 Hb_011928_030--Hb_004267_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0772273 8.2587 0.129717 2.77276 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.88913 0

CAGE analysis