Hb_000270_050

Information

Type -
Description -
Location Contig270: 37516-42320
Sequence    

Annotation

kegg
ID rcu:RCOM_1513400
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.25)
nr
ID XP_012080199.1
description PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Jatropha curcas]
swissprot
ID C0LGF4
description LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1
trembl
ID A0A067KHC1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11575 PE=3 SV=1
Gene Ontology
ID GO:0005622
description lrr receptor-like serine threonine-protein kinase fei 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28158: 37433-41802 , PASA_asmbl_28159: 40447-40642
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000270_050 0.0 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Jatropha curcas]
2 Hb_000289_020 0.1118652979 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
3 Hb_001205_290 0.1124138684 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP7-like [Jatropha curcas]
4 Hb_004732_070 0.1125934948 - - conserved hypothetical protein [Ricinus communis]
5 Hb_003489_010 0.1161799601 - - PREDICTED: metalloendoproteinase 1-like [Populus euphratica]
6 Hb_002307_150 0.1163217325 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA4-like [Jatropha curcas]
7 Hb_005211_170 0.1176519726 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
8 Hb_002970_030 0.1193540738 - - conserved hypothetical protein [Ricinus communis]
9 Hb_177195_010 0.1284316988 - - Leucine-rich repeat protein kinase family protein isoform 3, partial [Theobroma cacao]
10 Hb_000310_040 0.1347654839 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
11 Hb_000190_160 0.136077358 - - PREDICTED: uncharacterized protein LOC105649940 isoform X2 [Jatropha curcas]
12 Hb_003464_010 0.1377714762 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000039_080 0.1396793046 - - cyclin d, putative [Ricinus communis]
14 Hb_010080_050 0.1410538684 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
15 Hb_012092_040 0.1422160248 - - PREDICTED: expansin-A1 isoform X1 [Jatropha curcas]
16 Hb_001377_370 0.143364332 - - PREDICTED: uncharacterized protein At4g00950 [Jatropha curcas]
17 Hb_004319_010 0.1437660227 - - PREDICTED: peroxidase 63-like [Jatropha curcas]
18 Hb_012016_050 0.146718827 - - hypothetical protein JCGZ_09036 [Jatropha curcas]
19 Hb_000098_270 0.148339341 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
20 Hb_001091_060 0.1490349767 - - hypothetical protein JCGZ_27062 [Jatropha curcas]

Gene co-expression network

sample Hb_000270_050 Hb_000270_050 Hb_000289_020 Hb_000289_020 Hb_000270_050--Hb_000289_020 Hb_001205_290 Hb_001205_290 Hb_000270_050--Hb_001205_290 Hb_004732_070 Hb_004732_070 Hb_000270_050--Hb_004732_070 Hb_003489_010 Hb_003489_010 Hb_000270_050--Hb_003489_010 Hb_002307_150 Hb_002307_150 Hb_000270_050--Hb_002307_150 Hb_005211_170 Hb_005211_170 Hb_000270_050--Hb_005211_170 Hb_006120_130 Hb_006120_130 Hb_000289_020--Hb_006120_130 Hb_002028_270 Hb_002028_270 Hb_000289_020--Hb_002028_270 Hb_000098_270 Hb_000098_270 Hb_000289_020--Hb_000098_270 Hb_000289_020--Hb_005211_170 Hb_043552_010 Hb_043552_010 Hb_000289_020--Hb_043552_010 Hb_003464_010 Hb_003464_010 Hb_000289_020--Hb_003464_010 Hb_001247_060 Hb_001247_060 Hb_001205_290--Hb_001247_060 Hb_012092_040 Hb_012092_040 Hb_001205_290--Hb_012092_040 Hb_002970_030 Hb_002970_030 Hb_001205_290--Hb_002970_030 Hb_000089_090 Hb_000089_090 Hb_001205_290--Hb_000089_090 Hb_089140_070 Hb_089140_070 Hb_001205_290--Hb_089140_070 Hb_000310_040 Hb_000310_040 Hb_004732_070--Hb_000310_040 Hb_000190_160 Hb_000190_160 Hb_004732_070--Hb_000190_160 Hb_039075_010 Hb_039075_010 Hb_004732_070--Hb_039075_010 Hb_003777_150 Hb_003777_150 Hb_004732_070--Hb_003777_150 Hb_030360_010 Hb_030360_010 Hb_004732_070--Hb_030360_010 Hb_036602_010 Hb_036602_010 Hb_003489_010--Hb_036602_010 Hb_000483_120 Hb_000483_120 Hb_003489_010--Hb_000483_120 Hb_014549_010 Hb_014549_010 Hb_003489_010--Hb_014549_010 Hb_003489_010--Hb_000289_020 Hb_177179_020 Hb_177179_020 Hb_003489_010--Hb_177179_020 Hb_002307_150--Hb_005211_170 Hb_010080_050 Hb_010080_050 Hb_002307_150--Hb_010080_050 Hb_000333_140 Hb_000333_140 Hb_002307_150--Hb_000333_140 Hb_011628_010 Hb_011628_010 Hb_002307_150--Hb_011628_010 Hb_001971_040 Hb_001971_040 Hb_002307_150--Hb_001971_040 Hb_002307_150--Hb_002028_270 Hb_005211_170--Hb_000333_140 Hb_005211_170--Hb_010080_050 Hb_000445_260 Hb_000445_260 Hb_005211_170--Hb_000445_260 Hb_005211_170--Hb_000310_040 Hb_005211_170--Hb_011628_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.416429 3.78932 21.9511 35.2227 0.351231 0.538294
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0215637 0.0339344 0 1.98383 0.753905

CAGE analysis