Hb_000270_860

Information

Type -
Description -
Location Contig270: 703614-704480
Sequence    

Annotation

kegg
ID rcu:RCOM_1511190
description hypothetical protein
nr
ID XP_002511420.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9FM10
description Bidirectional sugar transporter SWEET5 OS=Arabidopsis thaliana GN=SWEET5 PE=2 SV=2
trembl
ID B9RB45
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1511190 PE=4 SV=1
Gene Ontology
ID GO:0005887
description bidirectional sugar transporter sweet5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000270_860 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001673_030 0.267512382 - - hypothetical protein JCGZ_08729 [Jatropha curcas]
3 Hb_059436_010 0.294427072 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
4 Hb_000454_020 0.2956718274 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
5 Hb_000656_130 0.2956758977 - - hypothetical protein PRUPE_ppa026157mg, partial [Prunus persica]
6 Hb_142068_020 0.2956854678 - - PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like [Jatropha curcas]
7 Hb_001248_040 0.2985639831 - - -
8 Hb_049014_010 0.3051531017 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
9 Hb_000002_320 0.3076819413 - - PREDICTED: uncharacterized protein LOC105632108 [Jatropha curcas]
10 Hb_178389_010 0.3129447534 - - PREDICTED: U-box domain-containing protein 15-like isoform X2 [Jatropha curcas]
11 Hb_075481_010 0.3147845964 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
12 Hb_000922_440 0.3165548351 - - -
13 Hb_021409_130 0.3197119799 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform 1 [Glycine max]
14 Hb_000274_030 0.3215135489 - - PREDICTED: uncharacterized protein LOC104647507 [Solanum lycopersicum]
15 Hb_003266_120 0.3237149365 - - PREDICTED: uncharacterized protein LOC105650228 [Jatropha curcas]
16 Hb_122567_010 0.3303959049 - - -
17 Hb_187661_010 0.3344266483 - - PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like [Jatropha curcas]
18 Hb_020549_010 0.3347264939 - - PREDICTED: uncharacterized protein LOC105638664 isoform X2 [Jatropha curcas]
19 Hb_005671_030 0.3364792029 - - -
20 Hb_001676_030 0.3384650526 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_000270_860 Hb_000270_860 Hb_001673_030 Hb_001673_030 Hb_000270_860--Hb_001673_030 Hb_059436_010 Hb_059436_010 Hb_000270_860--Hb_059436_010 Hb_000454_020 Hb_000454_020 Hb_000270_860--Hb_000454_020 Hb_000656_130 Hb_000656_130 Hb_000270_860--Hb_000656_130 Hb_142068_020 Hb_142068_020 Hb_000270_860--Hb_142068_020 Hb_001248_040 Hb_001248_040 Hb_000270_860--Hb_001248_040 Hb_020549_010 Hb_020549_010 Hb_001673_030--Hb_020549_010 Hb_001676_030 Hb_001676_030 Hb_001673_030--Hb_001676_030 Hb_000071_200 Hb_000071_200 Hb_001673_030--Hb_000071_200 Hb_005539_300 Hb_005539_300 Hb_001673_030--Hb_005539_300 Hb_000792_080 Hb_000792_080 Hb_001673_030--Hb_000792_080 Hb_000028_630 Hb_000028_630 Hb_059436_010--Hb_000028_630 Hb_000922_440 Hb_000922_440 Hb_059436_010--Hb_000922_440 Hb_184629_010 Hb_184629_010 Hb_059436_010--Hb_184629_010 Hb_001178_120 Hb_001178_120 Hb_059436_010--Hb_001178_120 Hb_040779_010 Hb_040779_010 Hb_059436_010--Hb_040779_010 Hb_028848_030 Hb_028848_030 Hb_059436_010--Hb_028848_030 Hb_000454_020--Hb_142068_020 Hb_000454_020--Hb_000656_130 Hb_049014_010 Hb_049014_010 Hb_000454_020--Hb_049014_010 Hb_075481_010 Hb_075481_010 Hb_000454_020--Hb_075481_010 Hb_122567_010 Hb_122567_010 Hb_000454_020--Hb_122567_010 Hb_187661_010 Hb_187661_010 Hb_000454_020--Hb_187661_010 Hb_000656_130--Hb_142068_020 Hb_000656_130--Hb_049014_010 Hb_000656_130--Hb_075481_010 Hb_000656_130--Hb_122567_010 Hb_000656_130--Hb_187661_010 Hb_142068_020--Hb_049014_010 Hb_142068_020--Hb_075481_010 Hb_142068_020--Hb_122567_010 Hb_142068_020--Hb_187661_010 Hb_021409_130 Hb_021409_130 Hb_001248_040--Hb_021409_130 Hb_003266_120 Hb_003266_120 Hb_001248_040--Hb_003266_120 Hb_000274_030 Hb_000274_030 Hb_001248_040--Hb_000274_030 Hb_043295_010 Hb_043295_010 Hb_001248_040--Hb_043295_010 Hb_007245_010 Hb_007245_010 Hb_001248_040--Hb_007245_010 Hb_000964_160 Hb_000964_160 Hb_001248_040--Hb_000964_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.150026 0 0.0382635 0 0 0.0447188
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis