Hb_000274_020

Information

Type -
Description -
Location Contig274: 30768-34999
Sequence    

Annotation

kegg
ID rcu:RCOM_1585980
description heat shock protein binding protein, putative
nr
ID XP_012068162.1
description PREDICTED: uncharacterized protein LOC105630805 isoform X1 [Jatropha curcas]
swissprot
ID Q9QYI5
description DnaJ homolog subfamily B member 2 OS=Mus musculus GN=Dnajb2 PE=1 SV=2
trembl
ID A0A067KZG6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15984 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28655: 30870-35154
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000274_020 0.0 - - PREDICTED: uncharacterized protein LOC105630805 isoform X1 [Jatropha curcas]
2 Hb_000751_130 0.0598676557 - - PREDICTED: mitochondrial import inner membrane translocase subunit tim16 [Jatropha curcas]
3 Hb_001109_020 0.0782959311 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000087_020 0.0787423273 - - PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial [Jatropha curcas]
5 Hb_000046_110 0.0795446745 - - PREDICTED: 54S ribosomal protein L39, mitochondrial [Jatropha curcas]
6 Hb_000444_050 0.0798283915 transcription factor TF Family: HMG PREDICTED: uncharacterized protein LOC105648212 isoform X2 [Jatropha curcas]
7 Hb_018133_060 0.081440433 - - PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Jatropha curcas]
8 Hb_015175_030 0.0828293263 - - PREDICTED: RNA-binding protein 24-A [Jatropha curcas]
9 Hb_004032_100 0.0844020533 - - PREDICTED: regulator of nonsense transcripts UPF3-like [Jatropha curcas]
10 Hb_005997_010 0.0855434973 - - Dihydroorotate dehydrogenase (quinone) [Morus notabilis]
11 Hb_000086_070 0.0875023592 - - Peptidase S24/S26A/S26B/S26C family protein isoform 1 [Theobroma cacao]
12 Hb_000329_310 0.087693368 - - PREDICTED: phosphatidate cytidylyltransferase 4, chloroplastic [Jatropha curcas]
13 Hb_001829_060 0.0881136276 - - Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis]
14 Hb_148209_080 0.0884943223 - - MED32, putative [Theobroma cacao]
15 Hb_000205_270 0.0894060629 - - PREDICTED: uncharacterized protein LOC105632722 isoform X1 [Jatropha curcas]
16 Hb_003927_130 0.0895386693 - - PREDICTED: nudix hydrolase 9 [Phoenix dactylifera]
17 Hb_005488_010 0.0909461289 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000024_080 0.0916245181 - - PREDICTED: probable complex I intermediate-associated protein 30 isoform X2 [Jatropha curcas]
19 Hb_001242_110 0.0928788587 - - 40S ribosomal protein S18, putative [Ricinus communis]
20 Hb_000380_190 0.0928831925 - - PREDICTED: exosome complex component MTR3 [Jatropha curcas]

Gene co-expression network

sample Hb_000274_020 Hb_000274_020 Hb_000751_130 Hb_000751_130 Hb_000274_020--Hb_000751_130 Hb_001109_020 Hb_001109_020 Hb_000274_020--Hb_001109_020 Hb_000087_020 Hb_000087_020 Hb_000274_020--Hb_000087_020 Hb_000046_110 Hb_000046_110 Hb_000274_020--Hb_000046_110 Hb_000444_050 Hb_000444_050 Hb_000274_020--Hb_000444_050 Hb_018133_060 Hb_018133_060 Hb_000274_020--Hb_018133_060 Hb_001829_060 Hb_001829_060 Hb_000751_130--Hb_001829_060 Hb_000751_130--Hb_000087_020 Hb_004032_100 Hb_004032_100 Hb_000751_130--Hb_004032_100 Hb_000751_130--Hb_000046_110 Hb_000172_030 Hb_000172_030 Hb_000751_130--Hb_000172_030 Hb_001109_020--Hb_001829_060 Hb_001109_020--Hb_000046_110 Hb_003927_130 Hb_003927_130 Hb_001109_020--Hb_003927_130 Hb_000205_270 Hb_000205_270 Hb_001109_020--Hb_000205_270 Hb_000883_050 Hb_000883_050 Hb_001109_020--Hb_000883_050 Hb_000086_070 Hb_000086_070 Hb_001109_020--Hb_000086_070 Hb_000024_080 Hb_000024_080 Hb_000087_020--Hb_000024_080 Hb_000087_020--Hb_000444_050 Hb_005398_030 Hb_005398_030 Hb_000087_020--Hb_005398_030 Hb_000087_020--Hb_004032_100 Hb_005997_010 Hb_005997_010 Hb_000087_020--Hb_005997_010 Hb_000046_110--Hb_001829_060 Hb_008311_010 Hb_008311_010 Hb_000046_110--Hb_008311_010 Hb_003632_010 Hb_003632_010 Hb_000046_110--Hb_003632_010 Hb_000046_110--Hb_003927_130 Hb_000444_050--Hb_000205_270 Hb_000444_050--Hb_000086_070 Hb_000444_050--Hb_005997_010 Hb_023732_070 Hb_023732_070 Hb_000444_050--Hb_023732_070 Hb_000329_310 Hb_000329_310 Hb_000444_050--Hb_000329_310 Hb_018133_060--Hb_000444_050 Hb_001604_080 Hb_001604_080 Hb_018133_060--Hb_001604_080 Hb_018133_060--Hb_023732_070 Hb_011781_030 Hb_011781_030 Hb_018133_060--Hb_011781_030 Hb_010180_020 Hb_010180_020 Hb_018133_060--Hb_010180_020 Hb_018133_060--Hb_000086_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
23.274 7.26183 3.41436 12.819 17.6975 37.3263
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
31.6689 52.2773 32.2785 11.3032 9.57341

CAGE analysis