Hb_000275_010

Information

Type -
Description -
Location Contig275: 21094-22017
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000275_010 0.0 - - -
2 Hb_005199_010 0.1689850799 - - conserved hypothetical protein [Ricinus communis]
3 Hb_109578_010 0.1707513093 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005222_020 0.1776365124 - - hypothetical protein [Beta vulgaris subsp. vulgaris]
5 Hb_002741_030 0.2063704538 - - -
6 Hb_145890_010 0.2130007042 - - unnamed protein product [Vitis vinifera]
7 Hb_001186_050 0.2223260556 - - -
8 Hb_000975_270 0.2405319629 - - PREDICTED: histone H2B.11-like [Phoenix dactylifera]
9 Hb_000094_260 0.2467537498 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000915_100 0.246909733 - - PREDICTED: auxin-induced protein 15A [Jatropha curcas]
11 Hb_000282_140 0.2469697195 - - hypothetical protein JCGZ_07670 [Jatropha curcas]
12 Hb_186158_010 0.2498212083 - - conserved hypothetical protein [Ricinus communis]
13 Hb_084889_010 0.2555902573 - - PREDICTED: uncharacterized protein LOC105638918 [Jatropha curcas]
14 Hb_001865_110 0.257058307 - - -
15 Hb_030765_010 0.257574911 desease resistance Gene Name: ABC_tran PREDICTED: ABC transporter G family member 11-like isoform X1 [Solanum lycopersicum]
16 Hb_000922_180 0.2682923585 - - PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5 [Jatropha curcas]
17 Hb_000046_200 0.2704459218 - - PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Jatropha curcas]
18 Hb_015401_010 0.2707188496 - - hypothetical protein VITISV_001548 [Vitis vinifera]
19 Hb_000736_010 0.2716659607 - - PREDICTED: uncharacterized protein LOC105762083 [Gossypium raimondii]
20 Hb_032974_010 0.2721856393 - - -

Gene co-expression network

sample Hb_000275_010 Hb_000275_010 Hb_005199_010 Hb_005199_010 Hb_000275_010--Hb_005199_010 Hb_109578_010 Hb_109578_010 Hb_000275_010--Hb_109578_010 Hb_005222_020 Hb_005222_020 Hb_000275_010--Hb_005222_020 Hb_002741_030 Hb_002741_030 Hb_000275_010--Hb_002741_030 Hb_145890_010 Hb_145890_010 Hb_000275_010--Hb_145890_010 Hb_001186_050 Hb_001186_050 Hb_000275_010--Hb_001186_050 Hb_005199_010--Hb_109578_010 Hb_001405_130 Hb_001405_130 Hb_005199_010--Hb_001405_130 Hb_004048_010 Hb_004048_010 Hb_005199_010--Hb_004048_010 Hb_000345_430 Hb_000345_430 Hb_005199_010--Hb_000345_430 Hb_007765_120 Hb_007765_120 Hb_005199_010--Hb_007765_120 Hb_000179_150 Hb_000179_150 Hb_109578_010--Hb_000179_150 Hb_109578_010--Hb_004048_010 Hb_084889_010 Hb_084889_010 Hb_109578_010--Hb_084889_010 Hb_001017_080 Hb_001017_080 Hb_109578_010--Hb_001017_080 Hb_001865_110 Hb_001865_110 Hb_005222_020--Hb_001865_110 Hb_001379_130 Hb_001379_130 Hb_005222_020--Hb_001379_130 Hb_000003_770 Hb_000003_770 Hb_005222_020--Hb_000003_770 Hb_000501_020 Hb_000501_020 Hb_005222_020--Hb_000501_020 Hb_000736_010 Hb_000736_010 Hb_005222_020--Hb_000736_010 Hb_002741_030--Hb_001186_050 Hb_002741_030--Hb_145890_010 Hb_010588_010 Hb_010588_010 Hb_002741_030--Hb_010588_010 Hb_000373_300 Hb_000373_300 Hb_002741_030--Hb_000373_300 Hb_030765_010 Hb_030765_010 Hb_002741_030--Hb_030765_010 Hb_012324_020 Hb_012324_020 Hb_145890_010--Hb_012324_020 Hb_094721_010 Hb_094721_010 Hb_145890_010--Hb_094721_010 Hb_145890_010--Hb_001186_050 Hb_145890_010--Hb_005222_020 Hb_000184_190 Hb_000184_190 Hb_145890_010--Hb_000184_190 Hb_001186_050--Hb_010588_010 Hb_001186_050--Hb_030765_010 Hb_001186_050--Hb_000373_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0558427 0 0.022245 0.0255249 0 0.0740148
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.256744 0.25236 0 0 0

CAGE analysis