Hb_000281_050

Information

Type -
Description -
Location Contig281: 45678-49592
Sequence    

Annotation

kegg
ID tcc:TCM_039861
description Subtilisin-like serine endopeptidase family protein
nr
ID XP_011048159.1
description PREDICTED: subtilisin-like protease SBT3.5 isoform X2 [Populus euphratica]
swissprot
ID Q9MAP7
description Subtilisin-like protease SBT3.5 OS=Arabidopsis thaliana GN=SBT3.5 PE=1 SV=1
trembl
ID A0A061GYM5
description Subtilisin-like serine endopeptidase family protein OS=Theobroma cacao GN=TCM_039861 PE=4 SV=1
Gene Ontology
ID GO:0004252
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000281_050 0.0 - - PREDICTED: subtilisin-like protease SBT3.5 isoform X2 [Populus euphratica]
2 Hb_003914_040 0.1037247935 - - hypothetical protein EUGRSUZ_H02626 [Eucalyptus grandis]
3 Hb_007040_020 0.1037250376 - - -
4 Hb_000295_150 0.1037540171 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
5 Hb_000125_050 0.1040317477 - - -
6 Hb_008686_050 0.1040319148 - - -
7 Hb_000494_140 0.1041722947 transcription factor TF Family: ERF hypothetical protein JCGZ_14625 [Jatropha curcas]
8 Hb_000039_130 0.1043997546 - - -
9 Hb_000049_320 0.1045389647 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Jatropha curcas]
10 Hb_053709_020 0.1046476652 - - Serine/threonine-protein kinase PBS1, putative [Ricinus communis]
11 Hb_184500_020 0.1046615221 - - -
12 Hb_003486_040 0.1046640757 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
13 Hb_000373_090 0.1047111163 - - PREDICTED: abscisic acid 8'-hydroxylase 3-like [Prunus mume]
14 Hb_023930_010 0.1048007287 - - hypothetical protein RCOM_0641040 [Ricinus communis]
15 Hb_000834_120 0.1049137804 transcription factor TF Family: OFP PREDICTED: transcription repressor OFP8 [Populus euphratica]
16 Hb_000032_110 0.1050858117 - - nadhp hc toxin reductase, putative [Ricinus communis]
17 Hb_002918_100 0.1051052352 - - hypothetical protein JCGZ_21466 [Jatropha curcas]
18 Hb_004881_090 0.1053207966 - - hypothetical protein POPTR_0002s06050g [Populus trichocarpa]
19 Hb_001689_060 0.1058317182 - - PREDICTED: uncharacterized protein LOC103846154 [Brassica rapa]
20 Hb_006111_050 0.1061526859 transcription factor TF Family: AP2 Protein AINTEGUMENTA, putative [Ricinus communis]

Gene co-expression network

sample Hb_000281_050 Hb_000281_050 Hb_003914_040 Hb_003914_040 Hb_000281_050--Hb_003914_040 Hb_007040_020 Hb_007040_020 Hb_000281_050--Hb_007040_020 Hb_000295_150 Hb_000295_150 Hb_000281_050--Hb_000295_150 Hb_000125_050 Hb_000125_050 Hb_000281_050--Hb_000125_050 Hb_008686_050 Hb_008686_050 Hb_000281_050--Hb_008686_050 Hb_000494_140 Hb_000494_140 Hb_000281_050--Hb_000494_140 Hb_003914_040--Hb_007040_020 Hb_003914_040--Hb_000295_150 Hb_003914_040--Hb_000125_050 Hb_003914_040--Hb_000494_140 Hb_000039_130 Hb_000039_130 Hb_003914_040--Hb_000039_130 Hb_053709_020 Hb_053709_020 Hb_003914_040--Hb_053709_020 Hb_007040_020--Hb_000295_150 Hb_007040_020--Hb_000125_050 Hb_007040_020--Hb_000494_140 Hb_007040_020--Hb_000039_130 Hb_007040_020--Hb_053709_020 Hb_000295_150--Hb_000125_050 Hb_000295_150--Hb_000494_140 Hb_000295_150--Hb_000039_130 Hb_000295_150--Hb_053709_020 Hb_000125_050--Hb_000494_140 Hb_000125_050--Hb_000039_130 Hb_000125_050--Hb_053709_020 Hb_000049_320 Hb_000049_320 Hb_008686_050--Hb_000049_320 Hb_003486_040 Hb_003486_040 Hb_008686_050--Hb_003486_040 Hb_000373_090 Hb_000373_090 Hb_008686_050--Hb_000373_090 Hb_000834_120 Hb_000834_120 Hb_008686_050--Hb_000834_120 Hb_004881_090 Hb_004881_090 Hb_008686_050--Hb_004881_090 Hb_008686_050--Hb_003914_040 Hb_000494_140--Hb_000039_130 Hb_000494_140--Hb_053709_020 Hb_184500_020 Hb_184500_020 Hb_000494_140--Hb_184500_020 Hb_023930_010 Hb_023930_010 Hb_000494_140--Hb_023930_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.173442 0.488928 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0144357 0 0 0

CAGE analysis