Hb_000281_200

Information

Type -
Description -
Location Contig281: 235383-237386
Sequence    

Annotation

kegg
ID rcu:RCOM_0343070
description serine-threonine protein kinase, plant-type, putative (EC:1.3.1.74)
nr
ID XP_012080817.1
description PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
swissprot
ID Q9C9H7
description Receptor-like protein 12 OS=Arabidopsis thaliana GN=RLP12 PE=2 SV=2
trembl
ID A0A067K325
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16186 PE=4 SV=1
Gene Ontology
ID GO:0005622
description lrr receptor-like serine threonine-protein kinase gso1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000281_200 0.0 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
2 Hb_001288_010 0.0693193074 - - -
3 Hb_005356_010 0.0698994931 - - hypothetical protein POPTR_0003s16550g [Populus trichocarpa]
4 Hb_007527_020 0.0785480626 - - PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Jatropha curcas]
5 Hb_003968_020 0.0832334427 - - PREDICTED: limonoid UDP-glucosyltransferase-like [Glycine max]
6 Hb_178389_020 0.0866323192 - - PREDICTED: cytochrome P450 86B1-like [Jatropha curcas]
7 Hb_039655_010 0.0915049631 - - PREDICTED: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like [Malus domestica]
8 Hb_001134_040 0.0952920726 - - PREDICTED: EG45-like domain containing protein [Jatropha curcas]
9 Hb_012660_010 0.0962297437 - - hypothetical protein JCGZ_25971 [Jatropha curcas]
10 Hb_000648_120 0.0970965622 - - PREDICTED: L-type lectin-domain containing receptor kinase IV.1 [Vitis vinifera]
11 Hb_000135_050 0.1013248739 - - PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210-like isoform X2 [Citrus sinensis]
12 Hb_002805_230 0.1020747107 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
13 Hb_000301_030 0.1030502343 - - PREDICTED: pectate lyase-like [Jatropha curcas]
14 Hb_058620_010 0.1047260531 - - cytochrome P450, putative [Ricinus communis]
15 Hb_001442_080 0.1054665034 transcription factor TF Family: MYB-related transcription factor MYB251 [Fagus crenata]
16 Hb_004564_010 0.1055429756 - - receptor-kinase, putative [Ricinus communis]
17 Hb_011486_030 0.1056060226 - - branched-chain amino acid aminotransferase, putative [Ricinus communis]
18 Hb_000076_200 0.1063639306 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000189_260 0.1069169204 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004204_160 0.1081256145 - - S-locus-specific glycoprotein S6 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_000281_200 Hb_000281_200 Hb_001288_010 Hb_001288_010 Hb_000281_200--Hb_001288_010 Hb_005356_010 Hb_005356_010 Hb_000281_200--Hb_005356_010 Hb_007527_020 Hb_007527_020 Hb_000281_200--Hb_007527_020 Hb_003968_020 Hb_003968_020 Hb_000281_200--Hb_003968_020 Hb_178389_020 Hb_178389_020 Hb_000281_200--Hb_178389_020 Hb_039655_010 Hb_039655_010 Hb_000281_200--Hb_039655_010 Hb_012660_010 Hb_012660_010 Hb_001288_010--Hb_012660_010 Hb_004564_010 Hb_004564_010 Hb_001288_010--Hb_004564_010 Hb_001288_010--Hb_178389_020 Hb_001442_080 Hb_001442_080 Hb_001288_010--Hb_001442_080 Hb_001288_010--Hb_003968_020 Hb_005356_010--Hb_007527_020 Hb_000301_030 Hb_000301_030 Hb_005356_010--Hb_000301_030 Hb_005356_010--Hb_178389_020 Hb_001544_040 Hb_001544_040 Hb_005356_010--Hb_001544_040 Hb_005356_010--Hb_001288_010 Hb_002805_230 Hb_002805_230 Hb_007527_020--Hb_002805_230 Hb_007532_050 Hb_007532_050 Hb_007527_020--Hb_007532_050 Hb_000513_110 Hb_000513_110 Hb_007527_020--Hb_000513_110 Hb_007527_020--Hb_001544_040 Hb_000076_200 Hb_000076_200 Hb_003968_020--Hb_000076_200 Hb_023080_010 Hb_023080_010 Hb_003968_020--Hb_023080_010 Hb_006620_040 Hb_006620_040 Hb_003968_020--Hb_006620_040 Hb_039562_010 Hb_039562_010 Hb_003968_020--Hb_039562_010 Hb_178389_020--Hb_004564_010 Hb_178389_020--Hb_001442_080 Hb_107258_010 Hb_107258_010 Hb_178389_020--Hb_107258_010 Hb_002900_020 Hb_002900_020 Hb_178389_020--Hb_002900_020 Hb_004204_160 Hb_004204_160 Hb_039655_010--Hb_004204_160 Hb_039655_010--Hb_005356_010 Hb_039655_010--Hb_178389_020 Hb_039655_010--Hb_004564_010 Hb_001134_040 Hb_001134_040 Hb_039655_010--Hb_001134_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0788749 2.16069 0.453445 1.6336 0.0662239 0.019055
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.112592 0.0708726 0.067202 35.0613 0.711494

CAGE analysis