Hb_000282_050

Information

Type -
Description -
Location Contig282: 117908-120531
Sequence    

Annotation

kegg
ID rcu:RCOM_0797610
description calcineurin B, putative
nr
ID XP_002516451.1
description calcineurin B, putative [Ricinus communis]
swissprot
ID Q7FRS8
description Calcineurin B-like protein 10 OS=Arabidopsis thaliana GN=CBL10 PE=1 SV=1
trembl
ID B9RRT2
description Calcineurin B, putative OS=Ricinus communis GN=RCOM_0797610 PE=4 SV=1
Gene Ontology
ID GO:0005509
description calcineurin b-like protein 10

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29516: 117906-120547
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000282_050 0.0 - - calcineurin B, putative [Ricinus communis]
2 Hb_188281_030 0.1264191109 - - PREDICTED: uridine nucleosidase 1 [Jatropha curcas]
3 Hb_000622_130 0.1265537004 - - PREDICTED: tubulin gamma-1 chain [Vitis vinifera]
4 Hb_007741_130 0.1390123502 - - hypothetical protein B456_007G089000 [Gossypium raimondii]
5 Hb_007044_090 0.1415844646 - - PREDICTED: isoprenylcysteine alpha-carbonyl methylesterase ICME isoform X2 [Jatropha curcas]
6 Hb_124677_030 0.1532732663 - - PREDICTED: uncharacterized protein LOC105650473 [Jatropha curcas]
7 Hb_004567_010 0.1556459144 - - PREDICTED: ER lumen protein-retaining receptor [Jatropha curcas]
8 Hb_000345_460 0.1609249117 - - PREDICTED: mitogen-activated protein kinase kinase kinase ANP1 [Jatropha curcas]
9 Hb_009486_210 0.1615089819 - - -
10 Hb_089140_090 0.161680038 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X3 [Beta vulgaris subsp. vulgaris]
11 Hb_006711_090 0.1617411287 - - PREDICTED: fatty acid 2-hydroxylase 1-like [Jatropha curcas]
12 Hb_000668_060 0.1641112057 - - Pollen-specific protein C13 precursor, putative [Ricinus communis]
13 Hb_004117_190 0.1684081156 - - PREDICTED: uncharacterized protein LOC105649109 [Jatropha curcas]
14 Hb_010488_040 0.1691934659 - - PREDICTED: phosphomannomutase [Populus euphratica]
15 Hb_007850_030 0.1695990639 - - PREDICTED: uncharacterized protein LOC105640669 [Jatropha curcas]
16 Hb_101146_010 0.1702793677 - - PREDICTED: peregrin-like [Jatropha curcas]
17 Hb_000580_100 0.1707374625 - - PREDICTED: uncharacterized protein LOC105643133 isoform X1 [Jatropha curcas]
18 Hb_003001_090 0.1738774282 - - PREDICTED: uncharacterized protein LOC105644365 [Jatropha curcas]
19 Hb_001191_080 0.1743683703 - - protein with unknown function [Ricinus communis]
20 Hb_001863_160 0.1744539644 - - PREDICTED: 14-3-3-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_000282_050 Hb_000282_050 Hb_188281_030 Hb_188281_030 Hb_000282_050--Hb_188281_030 Hb_000622_130 Hb_000622_130 Hb_000282_050--Hb_000622_130 Hb_007741_130 Hb_007741_130 Hb_000282_050--Hb_007741_130 Hb_007044_090 Hb_007044_090 Hb_000282_050--Hb_007044_090 Hb_124677_030 Hb_124677_030 Hb_000282_050--Hb_124677_030 Hb_004567_010 Hb_004567_010 Hb_000282_050--Hb_004567_010 Hb_188281_030--Hb_124677_030 Hb_000345_460 Hb_000345_460 Hb_188281_030--Hb_000345_460 Hb_000331_350 Hb_000331_350 Hb_188281_030--Hb_000331_350 Hb_002027_440 Hb_002027_440 Hb_188281_030--Hb_002027_440 Hb_001221_030 Hb_001221_030 Hb_188281_030--Hb_001221_030 Hb_000152_600 Hb_000152_600 Hb_000622_130--Hb_000152_600 Hb_001191_080 Hb_001191_080 Hb_000622_130--Hb_001191_080 Hb_000916_070 Hb_000916_070 Hb_000622_130--Hb_000916_070 Hb_000832_190 Hb_000832_190 Hb_000622_130--Hb_000832_190 Hb_005914_110 Hb_005914_110 Hb_000622_130--Hb_005914_110 Hb_000926_200 Hb_000926_200 Hb_000622_130--Hb_000926_200 Hb_007741_130--Hb_001191_080 Hb_001633_090 Hb_001633_090 Hb_007741_130--Hb_001633_090 Hb_007850_030 Hb_007850_030 Hb_007741_130--Hb_007850_030 Hb_005245_120 Hb_005245_120 Hb_007741_130--Hb_005245_120 Hb_001863_160 Hb_001863_160 Hb_007741_130--Hb_001863_160 Hb_053709_050 Hb_053709_050 Hb_007741_130--Hb_053709_050 Hb_005511_130 Hb_005511_130 Hb_007044_090--Hb_005511_130 Hb_000984_220 Hb_000984_220 Hb_007044_090--Hb_000984_220 Hb_029253_010 Hb_029253_010 Hb_007044_090--Hb_029253_010 Hb_006925_050 Hb_006925_050 Hb_007044_090--Hb_006925_050 Hb_003964_080 Hb_003964_080 Hb_007044_090--Hb_003964_080 Hb_000940_210 Hb_000940_210 Hb_124677_030--Hb_000940_210 Hb_124677_030--Hb_000345_460 Hb_001232_090 Hb_001232_090 Hb_124677_030--Hb_001232_090 Hb_010534_020 Hb_010534_020 Hb_124677_030--Hb_010534_020 Hb_000684_120 Hb_000684_120 Hb_124677_030--Hb_000684_120 Hb_002740_080 Hb_002740_080 Hb_004567_010--Hb_002740_080 Hb_003540_050 Hb_003540_050 Hb_004567_010--Hb_003540_050 Hb_004567_010--Hb_000152_600 Hb_005535_080 Hb_005535_080 Hb_004567_010--Hb_005535_080 Hb_000072_300 Hb_000072_300 Hb_004567_010--Hb_000072_300 Hb_000753_160 Hb_000753_160 Hb_004567_010--Hb_000753_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.06869 7.05117 38.6732 38.1888 4.27401 3.96113
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.64287 19.1364 8.67061 6.78179 5.4099

CAGE analysis