Hb_000282_140

Information

Type -
Description -
Location Contig282: 205014-205628
Sequence    

Annotation

kegg
ID rcu:RCOM_0797440
description hypothetical protein
nr
ID KDP34099.1
description hypothetical protein JCGZ_07670 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KQK0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07670 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_29532: 205302-205500
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000282_140 0.0 - - hypothetical protein JCGZ_07670 [Jatropha curcas]
2 Hb_001799_040 0.2264468432 - - -
3 Hb_000641_040 0.2294549412 - - PREDICTED: condensin complex subunit 1 isoform X1 [Jatropha curcas]
4 Hb_002768_020 0.2344370421 transcription factor TF Family: MYB hypothetical protein JCGZ_00902 [Jatropha curcas]
5 Hb_001427_140 0.2367055256 - - PREDICTED: probable phospholipase A2 homolog 1 [Jatropha curcas]
6 Hb_109578_010 0.2391591452 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000275_010 0.2469697195 - - -
8 Hb_030370_030 0.2590521679 - - putative wall-associated kinase family protein [Populus trichocarpa]
9 Hb_000398_030 0.2673853939 - - conserved hypothetical protein [Ricinus communis]
10 Hb_009913_030 0.2676208229 transcription factor TF Family: C2C2-GATA hypothetical protein JCGZ_05054 [Jatropha curcas]
11 Hb_084889_010 0.2719878116 - - PREDICTED: uncharacterized protein LOC105638918 [Jatropha curcas]
12 Hb_001143_010 0.2726185544 - - -
13 Hb_007416_220 0.2726216234 - - PREDICTED: uncharacterized protein LOC105637482 [Jatropha curcas]
14 Hb_004958_050 0.2735029743 - - hypothetical protein CICLE_v10032980mg [Citrus clementina]
15 Hb_000861_050 0.273929757 - - PREDICTED: transcription elongation factor SPT6-like isoform X1 [Populus euphratica]
16 Hb_000032_350 0.2754664325 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000922_170 0.2765277133 - - PREDICTED: uncharacterized protein LOC105640383 [Jatropha curcas]
18 Hb_001754_140 0.2776147444 - - PREDICTED: uncharacterized protein LOC105643419 [Jatropha curcas]
19 Hb_164926_020 0.2795553127 - - PREDICTED: uncharacterized protein LOC105645601 [Jatropha curcas]
20 Hb_005410_030 0.2804008963 - - glutaredoxin 2 [Hevea brasiliensis]

Gene co-expression network

sample Hb_000282_140 Hb_000282_140 Hb_001799_040 Hb_001799_040 Hb_000282_140--Hb_001799_040 Hb_000641_040 Hb_000641_040 Hb_000282_140--Hb_000641_040 Hb_002768_020 Hb_002768_020 Hb_000282_140--Hb_002768_020 Hb_001427_140 Hb_001427_140 Hb_000282_140--Hb_001427_140 Hb_109578_010 Hb_109578_010 Hb_000282_140--Hb_109578_010 Hb_000275_010 Hb_000275_010 Hb_000282_140--Hb_000275_010 Hb_000398_030 Hb_000398_030 Hb_001799_040--Hb_000398_030 Hb_000544_110 Hb_000544_110 Hb_001799_040--Hb_000544_110 Hb_002918_300 Hb_002918_300 Hb_001799_040--Hb_002918_300 Hb_000032_350 Hb_000032_350 Hb_001799_040--Hb_000032_350 Hb_007809_090 Hb_007809_090 Hb_001799_040--Hb_007809_090 Hb_001922_080 Hb_001922_080 Hb_001799_040--Hb_001922_080 Hb_004116_080 Hb_004116_080 Hb_000641_040--Hb_004116_080 Hb_000046_260 Hb_000046_260 Hb_000641_040--Hb_000046_260 Hb_007416_220 Hb_007416_220 Hb_000641_040--Hb_007416_220 Hb_000144_110 Hb_000144_110 Hb_000641_040--Hb_000144_110 Hb_001097_020 Hb_001097_020 Hb_000641_040--Hb_001097_020 Hb_000188_130 Hb_000188_130 Hb_000641_040--Hb_000188_130 Hb_000803_050 Hb_000803_050 Hb_002768_020--Hb_000803_050 Hb_000567_280 Hb_000567_280 Hb_002768_020--Hb_000567_280 Hb_026428_010 Hb_026428_010 Hb_002768_020--Hb_026428_010 Hb_011242_030 Hb_011242_030 Hb_002768_020--Hb_011242_030 Hb_003050_070 Hb_003050_070 Hb_002768_020--Hb_003050_070 Hb_115326_010 Hb_115326_010 Hb_001427_140--Hb_115326_010 Hb_006588_010 Hb_006588_010 Hb_001427_140--Hb_006588_010 Hb_081207_010 Hb_081207_010 Hb_001427_140--Hb_081207_010 Hb_002228_090 Hb_002228_090 Hb_001427_140--Hb_002228_090 Hb_175450_010 Hb_175450_010 Hb_001427_140--Hb_175450_010 Hb_005199_010 Hb_005199_010 Hb_109578_010--Hb_005199_010 Hb_109578_010--Hb_000275_010 Hb_000179_150 Hb_000179_150 Hb_109578_010--Hb_000179_150 Hb_004048_010 Hb_004048_010 Hb_109578_010--Hb_004048_010 Hb_084889_010 Hb_084889_010 Hb_109578_010--Hb_084889_010 Hb_001017_080 Hb_001017_080 Hb_109578_010--Hb_001017_080 Hb_000275_010--Hb_005199_010 Hb_005222_020 Hb_005222_020 Hb_000275_010--Hb_005222_020 Hb_002741_030 Hb_002741_030 Hb_000275_010--Hb_002741_030 Hb_145890_010 Hb_145890_010 Hb_000275_010--Hb_145890_010 Hb_001186_050 Hb_001186_050 Hb_000275_010--Hb_001186_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.1817 0.435075 7.49303 0.7022 0.126686 5.01512
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.5597 32.6722 2.55176 0.0940013 0

CAGE analysis