Hb_000283_160

Information

Type -
Description -
Location Contig283: 141568-142237
Sequence    

Annotation

kegg
ID rcu:RCOM_0484350
description hypothetical protein
nr
ID KDP23677.1
description hypothetical protein JCGZ_23510 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JIH6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23510 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000283_160 0.0 - - hypothetical protein JCGZ_23510 [Jatropha curcas]
2 Hb_031104_010 0.0032045395 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
3 Hb_072825_010 0.0034640536 - - Uncharacterized protein TCM_023328 [Theobroma cacao]
4 Hb_048482_010 0.0057525674 - - -
5 Hb_065059_010 0.0102677028 - - PREDICTED: uncharacterized protein LOC104907634 [Beta vulgaris subsp. vulgaris]
6 Hb_104984_010 0.0104548119 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
7 Hb_000118_050 0.0105256796 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
8 Hb_008269_020 0.0105931629 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_084299_010 0.0111873274 - - PREDICTED: uncharacterized protein LOC104233139 [Nicotiana sylvestris]
10 Hb_000206_260 0.0113433375 - - cysteine protease, putative [Ricinus communis]
11 Hb_002656_040 0.011430267 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
12 Hb_000001_030 0.011657404 - - polyprotein [Citrus endogenous pararetrovirus]
13 Hb_041626_010 0.014157853 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
14 Hb_099586_010 0.0141771608 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
15 Hb_073373_010 0.0147340215 - - hypothetical protein JCGZ_11284 [Jatropha curcas]
16 Hb_009813_040 0.0154442453 - - PREDICTED: uncharacterized protein LOC105775392, partial [Gossypium raimondii]
17 Hb_159777_010 0.016154213 - - JHL22C18.10 [Jatropha curcas]
18 Hb_000266_070 0.0174266342 desease resistance Gene Name: NB-ARC PREDICTED: uncharacterized protein LOC105765578 [Gossypium raimondii]
19 Hb_030085_050 0.0177474277 - - PREDICTED: uncharacterized protein LOC105797448 [Gossypium raimondii]
20 Hb_002020_030 0.0187366965 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]

Gene co-expression network

sample Hb_000283_160 Hb_000283_160 Hb_031104_010 Hb_031104_010 Hb_000283_160--Hb_031104_010 Hb_072825_010 Hb_072825_010 Hb_000283_160--Hb_072825_010 Hb_048482_010 Hb_048482_010 Hb_000283_160--Hb_048482_010 Hb_065059_010 Hb_065059_010 Hb_000283_160--Hb_065059_010 Hb_104984_010 Hb_104984_010 Hb_000283_160--Hb_104984_010 Hb_000118_050 Hb_000118_050 Hb_000283_160--Hb_000118_050 Hb_031104_010--Hb_048482_010 Hb_031104_010--Hb_072825_010 Hb_031104_010--Hb_104984_010 Hb_000206_260 Hb_000206_260 Hb_031104_010--Hb_000206_260 Hb_041626_010 Hb_041626_010 Hb_031104_010--Hb_041626_010 Hb_072825_010--Hb_065059_010 Hb_072825_010--Hb_000118_050 Hb_008269_020 Hb_008269_020 Hb_072825_010--Hb_008269_020 Hb_084299_010 Hb_084299_010 Hb_072825_010--Hb_084299_010 Hb_048482_010--Hb_104984_010 Hb_048482_010--Hb_000206_260 Hb_048482_010--Hb_041626_010 Hb_073373_010 Hb_073373_010 Hb_048482_010--Hb_073373_010 Hb_065059_010--Hb_000118_050 Hb_065059_010--Hb_008269_020 Hb_065059_010--Hb_084299_010 Hb_002656_040 Hb_002656_040 Hb_065059_010--Hb_002656_040 Hb_000001_030 Hb_000001_030 Hb_065059_010--Hb_000001_030 Hb_099586_010 Hb_099586_010 Hb_065059_010--Hb_099586_010 Hb_104984_010--Hb_000206_260 Hb_104984_010--Hb_041626_010 Hb_104984_010--Hb_073373_010 Hb_159777_010 Hb_159777_010 Hb_104984_010--Hb_159777_010 Hb_000266_070 Hb_000266_070 Hb_104984_010--Hb_000266_070 Hb_000118_050--Hb_008269_020 Hb_000118_050--Hb_084299_010 Hb_000118_050--Hb_002656_040 Hb_000118_050--Hb_000001_030 Hb_000118_050--Hb_099586_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0402002 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.165651

CAGE analysis