Hb_000283_170

Information

Type -
Description -
Location Contig283: 144593-146184
Sequence    

Annotation

kegg
ID rcu:RCOM_0484340
description ATP binding protein, putative (EC:2.7.11.25)
nr
ID XP_002531275.1
description ATP binding protein, putative [Ricinus communis]
swissprot
ID Q9SR05
description Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1
trembl
ID B9SZ56
description ATP binding protein, putative OS=Ricinus communis GN=RCOM_0484340 PE=3 SV=1
Gene Ontology
ID GO:0016324
description receptor-like protein kinase anxur1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000283_170 0.0 - - ATP binding protein, putative [Ricinus communis]
2 Hb_008021_020 0.00031369 transcription factor TF Family: GRF hypothetical protein POPTR_0014s00780g [Populus trichocarpa]
3 Hb_007289_010 0.0004658701 - - cytochrome P450, putative [Ricinus communis]
4 Hb_000856_220 0.0077676187 - - hypothetical protein POPTR_0012s07300g [Populus trichocarpa]
5 Hb_002793_010 0.0081876265 - - putative metal-nicotianamine transporter YSL7 -like protein [Gossypium arboreum]
6 Hb_000319_100 0.0083881089 - - PREDICTED: probable protein Pop3 [Jatropha curcas]
7 Hb_185830_040 0.008634392 - - hypothetical protein JCGZ_16423 [Jatropha curcas]
8 Hb_001587_130 0.0087222442 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
9 Hb_000156_020 0.0097902646 - - PREDICTED: la-related protein 6A [Jatropha curcas]
10 Hb_003176_030 0.0097902646 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Solanum lycopersicum]
11 Hb_004000_030 0.0098004136 - - putative retrotransposon protein [Phyllostachys edulis]
12 Hb_181803_010 0.0098742175 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
13 Hb_183433_020 0.011081855 - - PREDICTED: uncharacterized protein LOC105851424 [Cicer arietinum]
14 Hb_000940_090 0.0116398904 - - hypothetical protein CISIN_1g046520mg [Citrus sinensis]
15 Hb_170365_010 0.0116831475 - - Retrotransposon protein, putative [Theobroma cacao]
16 Hb_052135_010 0.0117830748 - - PREDICTED: phytochrome B isoform X2 [Jatropha curcas]
17 Hb_005714_080 0.0135592899 transcription factor TF Family: B3 PREDICTED: uncharacterized protein LOC105109431 [Populus euphratica]
18 Hb_007227_010 0.0179368801 - - hypothetical protein BN927_00890 [Lactococcus lactis subsp. lactis Dephy 1]
19 Hb_042666_010 0.0195449274 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
20 Hb_000023_040 0.027471819 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_000283_170 Hb_000283_170 Hb_008021_020 Hb_008021_020 Hb_000283_170--Hb_008021_020 Hb_007289_010 Hb_007289_010 Hb_000283_170--Hb_007289_010 Hb_000856_220 Hb_000856_220 Hb_000283_170--Hb_000856_220 Hb_002793_010 Hb_002793_010 Hb_000283_170--Hb_002793_010 Hb_000319_100 Hb_000319_100 Hb_000283_170--Hb_000319_100 Hb_185830_040 Hb_185830_040 Hb_000283_170--Hb_185830_040 Hb_008021_020--Hb_007289_010 Hb_008021_020--Hb_000856_220 Hb_008021_020--Hb_002793_010 Hb_008021_020--Hb_185830_040 Hb_008021_020--Hb_000319_100 Hb_007289_010--Hb_000856_220 Hb_007289_010--Hb_002793_010 Hb_007289_010--Hb_185830_040 Hb_007289_010--Hb_000319_100 Hb_000856_220--Hb_002793_010 Hb_000856_220--Hb_185830_040 Hb_004000_030 Hb_004000_030 Hb_000856_220--Hb_004000_030 Hb_181803_010 Hb_181803_010 Hb_000856_220--Hb_181803_010 Hb_183433_020 Hb_183433_020 Hb_000856_220--Hb_183433_020 Hb_170365_010 Hb_170365_010 Hb_000856_220--Hb_170365_010 Hb_002793_010--Hb_185830_040 Hb_002793_010--Hb_004000_030 Hb_002793_010--Hb_181803_010 Hb_002793_010--Hb_183433_020 Hb_002793_010--Hb_170365_010 Hb_001587_130 Hb_001587_130 Hb_000319_100--Hb_001587_130 Hb_000156_020 Hb_000156_020 Hb_000319_100--Hb_000156_020 Hb_003176_030 Hb_003176_030 Hb_000319_100--Hb_003176_030 Hb_000940_090 Hb_000940_090 Hb_000319_100--Hb_000940_090 Hb_185830_040--Hb_004000_030 Hb_185830_040--Hb_181803_010 Hb_185830_040--Hb_183433_020 Hb_185830_040--Hb_170365_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0111316 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00999303 0

CAGE analysis