Hb_000284_010

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig284: 6808-21764
Sequence    

Annotation

kegg
ID mdm:103412199
description protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like
nr
ID KDP38817.1
description hypothetical protein JCGZ_04974 [Jatropha curcas]
swissprot
ID P0CB16
description Putative disease resistance protein At4g19050 OS=Arabidopsis thaliana GN=At4g19050 PE=3 SV=2
trembl
ID A0A067KRS6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04974 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000284_010 0.0 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_04974 [Jatropha curcas]
2 Hb_115919_020 0.0603515719 rubber biosynthesis Gene Name: Geranyl geranyl diphosphate synthase geranyl-diphosphate synthase [Hevea brasiliensis]
3 Hb_000078_030 0.0672428763 - - conserved hypothetical protein [Ricinus communis]
4 Hb_005016_130 0.077245005 - - PREDICTED: uncharacterized protein LOC105642243 [Jatropha curcas]
5 Hb_002221_080 0.0929077326 - - PREDICTED: uncharacterized protein LOC105639992 [Jatropha curcas]
6 Hb_002298_040 0.0943614187 - - PREDICTED: uncharacterized protein LOC105633642 [Jatropha curcas]
7 Hb_000193_230 0.0958289978 - - PREDICTED: NEP1-interacting protein-like 2 isoform X1 [Jatropha curcas]
8 Hb_012305_060 0.100281658 - - protein translocase, putative [Ricinus communis]
9 Hb_001741_080 0.1007261726 rubber biosynthesis Gene Name: REF8 small rubber particle protein [Hevea brasiliensis]
10 Hb_010578_090 0.1009899227 - - HEV2.1 [Hevea brasiliensis]
11 Hb_000184_180 0.1060999454 - - putative C3HC4-type RING zinc finger protein [Hevea brasiliensis]
12 Hb_000580_170 0.1078084028 - - PREDICTED: arginase 1, mitochondrial [Jatropha curcas]
13 Hb_012799_060 0.1078532857 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
14 Hb_060668_010 0.1105330097 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
15 Hb_030765_020 0.1107760817 - - ABC transporter family protein [Hevea brasiliensis]
16 Hb_000787_070 0.1153822352 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
17 Hb_003057_130 0.1156953425 - - -
18 Hb_008847_010 0.117527003 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]
19 Hb_008408_030 0.1182238376 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
20 Hb_029879_080 0.1188471387 - - unknown [Populus trichocarpa]

Gene co-expression network

sample Hb_000284_010 Hb_000284_010 Hb_115919_020 Hb_115919_020 Hb_000284_010--Hb_115919_020 Hb_000078_030 Hb_000078_030 Hb_000284_010--Hb_000078_030 Hb_005016_130 Hb_005016_130 Hb_000284_010--Hb_005016_130 Hb_002221_080 Hb_002221_080 Hb_000284_010--Hb_002221_080 Hb_002298_040 Hb_002298_040 Hb_000284_010--Hb_002298_040 Hb_000193_230 Hb_000193_230 Hb_000284_010--Hb_000193_230 Hb_115919_020--Hb_005016_130 Hb_115919_020--Hb_000078_030 Hb_000787_070 Hb_000787_070 Hb_115919_020--Hb_000787_070 Hb_115919_020--Hb_000193_230 Hb_115919_020--Hb_002298_040 Hb_000078_030--Hb_000193_230 Hb_000078_030--Hb_005016_130 Hb_001102_010 Hb_001102_010 Hb_000078_030--Hb_001102_010 Hb_000078_030--Hb_002298_040 Hb_005016_130--Hb_000787_070 Hb_001741_080 Hb_001741_080 Hb_005016_130--Hb_001741_080 Hb_010578_090 Hb_010578_090 Hb_005016_130--Hb_010578_090 Hb_002221_080--Hb_002298_040 Hb_002221_080--Hb_005016_130 Hb_002221_080--Hb_000078_030 Hb_002221_080--Hb_115919_020 Hb_002221_080--Hb_000787_070 Hb_002298_040--Hb_000193_230 Hb_002298_040--Hb_005016_130 Hb_002298_040--Hb_010578_090 Hb_029879_080 Hb_029879_080 Hb_002298_040--Hb_029879_080 Hb_006787_040 Hb_006787_040 Hb_000193_230--Hb_006787_040 Hb_012305_060 Hb_012305_060 Hb_000193_230--Hb_012305_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.3236 0.517256 0.123089 0.384494 8.66893 14.3512
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
24.3294 18.6461 9.49452 1.96304 0.26061

CAGE analysis