Hb_000284_050

Information

Type -
Description -
Location Contig284: 89907-90906
Sequence    

Annotation

kegg
ID -
description -
nr
ID XP_010097958.1
description hypothetical protein L484_026849 [Morus notabilis]
swissprot
ID -
description -
trembl
ID W9RGK9
description Uncharacterized protein OS=Morus notabilis GN=L484_026849 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000284_050 0.0 - - hypothetical protein L484_026849 [Morus notabilis]
2 Hb_010053_050 0.0441069212 - - hypothetical protein POPTR_0530s002102g, partial [Populus trichocarpa]
3 Hb_010053_060 0.0578358513 - - ATP-binding cassette transporter, putative [Ricinus communis]
4 Hb_002041_010 0.0635134613 - - -
5 Hb_004161_040 0.0674993364 - - PREDICTED: putative receptor-like protein kinase At4g00960 [Populus euphratica]
6 Hb_000497_310 0.0696707416 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000938_050 0.0988045349 - - hypothetical protein JCGZ_09640 [Jatropha curcas]
8 Hb_001627_070 0.109135682 transcription factor TF Family: MIKC PREDICTED: developmental protein SEPALLATA 1 [Nelumbo nucifera]
9 Hb_000574_080 0.1096865895 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
10 Hb_012184_020 0.1097395044 - - conserved hypothetical protein [Ricinus communis]
11 Hb_002395_010 0.1103025483 - - -
12 Hb_005622_090 0.1106522143 - - hypothetical protein CICLE_v10027074mg [Citrus clementina]
13 Hb_004987_040 0.11307924 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
14 Hb_131816_010 0.1149953439 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
15 Hb_018283_010 0.1151619803 - - hypothetical protein VITISV_023498 [Vitis vinifera]
16 Hb_003157_020 0.1163127034 - - PREDICTED: uncharacterized protein LOC104809111 [Tarenaya hassleriana]
17 Hb_080126_010 0.1167192615 transcription factor TF Family: FAR1 hypothetical protein MIMGU_mgv1a025104mg, partial [Erythranthe guttata]
18 Hb_127361_010 0.1167912895 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
19 Hb_007219_010 0.1170791549 - - -
20 Hb_004987_050 0.1178911046 - - -

Gene co-expression network

sample Hb_000284_050 Hb_000284_050 Hb_010053_050 Hb_010053_050 Hb_000284_050--Hb_010053_050 Hb_010053_060 Hb_010053_060 Hb_000284_050--Hb_010053_060 Hb_002041_010 Hb_002041_010 Hb_000284_050--Hb_002041_010 Hb_004161_040 Hb_004161_040 Hb_000284_050--Hb_004161_040 Hb_000497_310 Hb_000497_310 Hb_000284_050--Hb_000497_310 Hb_000938_050 Hb_000938_050 Hb_000284_050--Hb_000938_050 Hb_010053_050--Hb_010053_060 Hb_010053_050--Hb_004161_040 Hb_010053_050--Hb_000938_050 Hb_131816_010 Hb_131816_010 Hb_010053_050--Hb_131816_010 Hb_005622_090 Hb_005622_090 Hb_010053_050--Hb_005622_090 Hb_010053_060--Hb_131816_010 Hb_010053_060--Hb_000938_050 Hb_010053_060--Hb_004161_040 Hb_000959_380 Hb_000959_380 Hb_010053_060--Hb_000959_380 Hb_002041_010--Hb_000497_310 Hb_015824_020 Hb_015824_020 Hb_002041_010--Hb_015824_020 Hb_023386_030 Hb_023386_030 Hb_002041_010--Hb_023386_030 Hb_002041_010--Hb_010053_050 Hb_002041_010--Hb_010053_060 Hb_007219_010 Hb_007219_010 Hb_004161_040--Hb_007219_010 Hb_059280_010 Hb_059280_010 Hb_004161_040--Hb_059280_010 Hb_002276_110 Hb_002276_110 Hb_004161_040--Hb_002276_110 Hb_000574_080 Hb_000574_080 Hb_004161_040--Hb_000574_080 Hb_000497_310--Hb_015824_020 Hb_000497_310--Hb_023386_030 Hb_004968_090 Hb_004968_090 Hb_000497_310--Hb_004968_090 Hb_005666_030 Hb_005666_030 Hb_000497_310--Hb_005666_030 Hb_005018_050 Hb_005018_050 Hb_000938_050--Hb_005018_050 Hb_003407_050 Hb_003407_050 Hb_000938_050--Hb_003407_050 Hb_031194_030 Hb_031194_030 Hb_000938_050--Hb_031194_030 Hb_003120_090 Hb_003120_090 Hb_000938_050--Hb_003120_090 Hb_002704_090 Hb_002704_090 Hb_000938_050--Hb_002704_090 Hb_002835_420 Hb_002835_420 Hb_000938_050--Hb_002835_420
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0199538 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0182776 0.736019

CAGE analysis