Hb_000284_190

Information

Type -
Description -
Location Contig284: 227983-233323
Sequence    

Annotation

kegg
ID rcu:RCOM_0759770
description lactoylglutathione lyase, putative
nr
ID XP_002526462.1
description lactoylglutathione lyase, putative [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SKE3
description Lactoylglutathione lyase, putative OS=Ricinus communis GN=RCOM_0759770 PE=4 SV=1
Gene Ontology
ID GO:0003824
description lactoylglutathione lyase glyoxalase i family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000284_190 0.0 - - lactoylglutathione lyase, putative [Ricinus communis]
2 Hb_001085_180 0.1808049028 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000012_070 0.1830770555 - - cytochrome P450, putative [Ricinus communis]
4 Hb_012573_010 0.1961311757 - - PREDICTED: uncharacterized protein LOC105639338 [Jatropha curcas]
5 Hb_000258_180 0.1984733082 - - PREDICTED: glutathione S-transferase U10-like [Vitis vinifera]
6 Hb_001266_030 0.2113738687 - - PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic-like [Jatropha curcas]
7 Hb_032202_250 0.2126085046 - - PREDICTED: F-box protein PP2-A13 [Jatropha curcas]
8 Hb_002903_010 0.2225071682 - - 60S ribosomal protein L37-3 [Morus notabilis]
9 Hb_044653_060 0.2229951556 - - PREDICTED: uncharacterized protein LOC105628750 [Jatropha curcas]
10 Hb_004968_070 0.2247562363 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001140_240 0.2275901272 - - metal ion binding protein, putative [Ricinus communis]
12 Hb_000270_730 0.2296707569 - - PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Jatropha curcas]
13 Hb_001842_080 0.2321815185 - - -
14 Hb_000045_210 0.2344944245 - - -
15 Hb_000239_110 0.2358055687 - - PREDICTED: adenine phosphoribosyltransferase 1-like [Jatropha curcas]
16 Hb_003376_380 0.2419296879 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Jatropha curcas]
17 Hb_000504_010 0.2421027563 - - oleosin 18.2 kDa-like [Jatropha curcas]
18 Hb_183612_080 0.2452784043 - - hypothetical protein POPTR_0001s00500g [Populus trichocarpa]
19 Hb_042871_010 0.2511688846 - - PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like [Jatropha curcas]
20 Hb_000062_300 0.2513485961 - - PREDICTED: uncharacterized protein LOC105644761 [Jatropha curcas]

Gene co-expression network

sample Hb_000284_190 Hb_000284_190 Hb_001085_180 Hb_001085_180 Hb_000284_190--Hb_001085_180 Hb_000012_070 Hb_000012_070 Hb_000284_190--Hb_000012_070 Hb_012573_010 Hb_012573_010 Hb_000284_190--Hb_012573_010 Hb_000258_180 Hb_000258_180 Hb_000284_190--Hb_000258_180 Hb_001266_030 Hb_001266_030 Hb_000284_190--Hb_001266_030 Hb_032202_250 Hb_032202_250 Hb_000284_190--Hb_032202_250 Hb_012305_020 Hb_012305_020 Hb_001085_180--Hb_012305_020 Hb_183612_090 Hb_183612_090 Hb_001085_180--Hb_183612_090 Hb_004968_070 Hb_004968_070 Hb_001085_180--Hb_004968_070 Hb_061383_010 Hb_061383_010 Hb_001085_180--Hb_061383_010 Hb_001085_180--Hb_032202_250 Hb_000012_070--Hb_000258_180 Hb_000062_300 Hb_000062_300 Hb_000012_070--Hb_000062_300 Hb_000012_070--Hb_032202_250 Hb_000012_070--Hb_012573_010 Hb_034482_040 Hb_034482_040 Hb_000012_070--Hb_034482_040 Hb_006277_070 Hb_006277_070 Hb_012573_010--Hb_006277_070 Hb_000002_170 Hb_000002_170 Hb_012573_010--Hb_000002_170 Hb_012573_010--Hb_000258_180 Hb_012573_010--Hb_000062_300 Hb_000258_180--Hb_032202_250 Hb_000045_210 Hb_000045_210 Hb_000258_180--Hb_000045_210 Hb_000258_180--Hb_034482_040 Hb_003226_240 Hb_003226_240 Hb_000258_180--Hb_003226_240 Hb_001433_100 Hb_001433_100 Hb_000258_180--Hb_001433_100 Hb_044653_060 Hb_044653_060 Hb_001266_030--Hb_044653_060 Hb_012053_010 Hb_012053_010 Hb_001266_030--Hb_012053_010 Hb_001266_030--Hb_000045_210 Hb_027892_040 Hb_027892_040 Hb_001266_030--Hb_027892_040 Hb_000431_160 Hb_000431_160 Hb_001266_030--Hb_000431_160 Hb_000617_110 Hb_000617_110 Hb_001266_030--Hb_000617_110 Hb_032202_250--Hb_003226_240 Hb_001842_080 Hb_001842_080 Hb_032202_250--Hb_001842_080 Hb_000300_210 Hb_000300_210 Hb_032202_250--Hb_000300_210 Hb_032202_250--Hb_001433_100 Hb_032202_250--Hb_034482_040 Hb_002989_040 Hb_002989_040 Hb_032202_250--Hb_002989_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.25647 0.171943 0.608342 3.99983 0.145044 0.419752
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
22.1328 113.136 4.25642 3.79874 5.20965

CAGE analysis