Hb_000291_010

Information

Type -
Description -
Location Contig291: 6922-9303
Sequence    

Annotation

kegg
ID rcu:RCOM_1032850
description Mitogen-activated protein kinase kinase kinase, putative (EC:2.7.11.25)
nr
ID XP_012078154.1
description PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Jatropha curcas]
swissprot
ID Q39008
description Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2
trembl
ID A0A067K9I5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12034 PE=4 SV=1
Gene Ontology
ID GO:0005622
description mitogen-activated protein kinase kinase kinase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30489: 6962-13934
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000291_010 0.0 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Jatropha curcas]
2 Hb_001104_170 0.077561926 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor A-2c [Jatropha curcas]
3 Hb_012239_020 0.080399356 - - PREDICTED: protein VAC14 homolog [Jatropha curcas]
4 Hb_005018_020 0.08403777 - - PREDICTED: pentatricopeptide repeat-containing protein At1g07740, mitochondrial [Jatropha curcas]
5 Hb_060094_020 0.0853012856 desease resistance Gene Name: ATP_bind_1 xpa-binding protein, putative [Ricinus communis]
6 Hb_001279_170 0.0880412099 - - PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2, mitochondrial [Jatropha curcas]
7 Hb_000086_420 0.0918879801 - - PREDICTED: phospholipid--sterol O-acyltransferase [Jatropha curcas]
8 Hb_000169_080 0.0927604509 transcription factor TF Family: TUB PREDICTED: tubby-like F-box protein 3 [Jatropha curcas]
9 Hb_001300_010 0.0935977508 transcription factor TF Family: C3H nucleic acid binding protein, putative [Ricinus communis]
10 Hb_004870_050 0.0955322417 - - PREDICTED: ATP-dependent RNA helicase DBP3 [Jatropha curcas]
11 Hb_006588_210 0.0960978843 - - PREDICTED: E3 ubiquitin-protein ligase Hakai [Jatropha curcas]
12 Hb_010287_020 0.0965315328 - - CCR4-NOT transcription complex subunit, putative [Ricinus communis]
13 Hb_000373_230 0.0968756663 transcription factor TF Family: TUB phosphoric diester hydrolase, putative [Ricinus communis]
14 Hb_004943_030 0.0975819671 - - PREDICTED: cation-chloride cotransporter 1 [Jatropha curcas]
15 Hb_000398_100 0.0990757401 - - Uncharacterized protein isoform 2 [Theobroma cacao]
16 Hb_000375_290 0.0998238773 - - DAG protein, chloroplast precursor, putative [Ricinus communis]
17 Hb_000484_130 0.1012443845 - - splicing factor, putative [Ricinus communis]
18 Hb_000120_030 0.102027999 - - PREDICTED: uncharacterized protein LOC105630385 isoform X1 [Jatropha curcas]
19 Hb_000327_140 0.1021503237 - - PREDICTED: probable adenylate kinase 6, chloroplastic [Jatropha curcas]
20 Hb_001410_020 0.1025231136 - - cdk8, putative [Ricinus communis]

Gene co-expression network

sample Hb_000291_010 Hb_000291_010 Hb_001104_170 Hb_001104_170 Hb_000291_010--Hb_001104_170 Hb_012239_020 Hb_012239_020 Hb_000291_010--Hb_012239_020 Hb_005018_020 Hb_005018_020 Hb_000291_010--Hb_005018_020 Hb_060094_020 Hb_060094_020 Hb_000291_010--Hb_060094_020 Hb_001279_170 Hb_001279_170 Hb_000291_010--Hb_001279_170 Hb_000086_420 Hb_000086_420 Hb_000291_010--Hb_000086_420 Hb_000442_010 Hb_000442_010 Hb_001104_170--Hb_000442_010 Hb_005389_160 Hb_005389_160 Hb_001104_170--Hb_005389_160 Hb_001766_020 Hb_001766_020 Hb_001104_170--Hb_001766_020 Hb_000363_400 Hb_000363_400 Hb_001104_170--Hb_000363_400 Hb_001410_020 Hb_001410_020 Hb_001104_170--Hb_001410_020 Hb_000738_020 Hb_000738_020 Hb_012239_020--Hb_000738_020 Hb_000484_130 Hb_000484_130 Hb_012239_020--Hb_000484_130 Hb_012239_020--Hb_000086_420 Hb_004994_240 Hb_004994_240 Hb_012239_020--Hb_004994_240 Hb_001300_010 Hb_001300_010 Hb_012239_020--Hb_001300_010 Hb_000327_140 Hb_000327_140 Hb_012239_020--Hb_000327_140 Hb_005018_020--Hb_060094_020 Hb_000061_030 Hb_000061_030 Hb_005018_020--Hb_000061_030 Hb_005018_020--Hb_001104_170 Hb_002263_040 Hb_002263_040 Hb_005018_020--Hb_002263_040 Hb_002329_020 Hb_002329_020 Hb_005018_020--Hb_002329_020 Hb_023226_070 Hb_023226_070 Hb_060094_020--Hb_023226_070 Hb_003927_040 Hb_003927_040 Hb_060094_020--Hb_003927_040 Hb_004870_050 Hb_004870_050 Hb_060094_020--Hb_004870_050 Hb_000645_170 Hb_000645_170 Hb_060094_020--Hb_000645_170 Hb_001754_030 Hb_001754_030 Hb_060094_020--Hb_001754_030 Hb_010417_070 Hb_010417_070 Hb_060094_020--Hb_010417_070 Hb_000617_230 Hb_000617_230 Hb_001279_170--Hb_000617_230 Hb_001789_060 Hb_001789_060 Hb_001279_170--Hb_001789_060 Hb_001279_170--Hb_000484_130 Hb_001862_210 Hb_001862_210 Hb_001279_170--Hb_001862_210 Hb_002675_130 Hb_002675_130 Hb_001279_170--Hb_002675_130 Hb_000086_420--Hb_000327_140 Hb_000029_060 Hb_000029_060 Hb_000086_420--Hb_000029_060 Hb_000086_420--Hb_004994_240 Hb_000292_100 Hb_000292_100 Hb_000086_420--Hb_000292_100 Hb_000086_420--Hb_000738_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.1082 53.0112 45.1678 18.8623 15.534 18.9854
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
17.5322 25.2057 28.5186 23.4944 20.9005

CAGE analysis