Hb_000291_090

Information

Type -
Description -
Location Contig291: 72284-76708
Sequence    

Annotation

kegg
ID tcc:TCM_035004
description Galactosyltransferase family protein
nr
ID XP_012078143.1
description PREDICTED: beta-1,3-galactosyltransferase 7 isoform X2 [Jatropha curcas]
swissprot
ID Q6NQB7
description Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1
trembl
ID A0A067KKF9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12027 PE=4 SV=1
Gene Ontology
ID GO:0005794
description galactosyltransferase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_30500: 72294-75796 , PASA_asmbl_30501: 74333-74658 , PASA_asmbl_30502: 76196-76467
cDNA
(Sanger)
(ID:Location)		 022_E18.ab1: 72600-74188

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000291_090 0.0 - - PREDICTED: beta-1,3-galactosyltransferase 7 isoform X2 [Jatropha curcas]
2 Hb_001054_030 0.0727182645 transcription factor TF Family: NF-X1 PREDICTED: NF-X1-type zinc finger protein NFXL1 [Jatropha curcas]
3 Hb_000453_060 0.0819856747 - - PREDICTED: pentatricopeptide repeat-containing protein At4g11690 [Jatropha curcas]
4 Hb_032808_030 0.0842424127 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
5 Hb_000009_500 0.0858519066 - - PREDICTED: NASP-related protein sim3 [Jatropha curcas]
6 Hb_002006_040 0.0865700919 - - PREDICTED: translation initiation factor eIF-2B subunit delta isoform X1 [Jatropha curcas]
7 Hb_002960_080 0.0893214194 transcription factor TF Family: IWS1 PREDICTED: uncharacterized protein LOC105635322 [Jatropha curcas]
8 Hb_011849_040 0.0919559381 - - ubiquitin-protein ligase, putative [Ricinus communis]
9 Hb_009615_170 0.0929636713 - - PREDICTED: sphingoid long-chain bases kinase 1 isoform X1 [Jatropha curcas]
10 Hb_003729_030 0.0936672702 - - PREDICTED: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 [Jatropha curcas]
11 Hb_000402_230 0.0949714366 - - PREDICTED: sorting nexin 2A-like isoform X1 [Jatropha curcas]
12 Hb_000574_100 0.0951949776 - - DEAD-box protein abstrakt [Populus trichocarpa]
13 Hb_159558_010 0.0958682083 - - PREDICTED: uncharacterized protein LOC105635846 [Jatropha curcas]
14 Hb_000237_140 0.0958810163 - - PREDICTED: RNA-binding protein 28 [Jatropha curcas]
15 Hb_023226_080 0.096092851 transcription factor TF Family: C3H PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30 isoform X1 [Jatropha curcas]
16 Hb_001195_320 0.0970849685 - - PREDICTED: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase [Jatropha curcas]
17 Hb_144744_010 0.0982037179 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
18 Hb_010712_090 0.0984741509 - - PREDICTED: uncharacterized protein LOC105631276 [Jatropha curcas]
19 Hb_000170_150 0.1005998456 - - PREDICTED: uncharacterized protein LOC105638996 isoform X3 [Jatropha curcas]
20 Hb_000166_130 0.1009696338 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000291_090 Hb_000291_090 Hb_001054_030 Hb_001054_030 Hb_000291_090--Hb_001054_030 Hb_000453_060 Hb_000453_060 Hb_000291_090--Hb_000453_060 Hb_032808_030 Hb_032808_030 Hb_000291_090--Hb_032808_030 Hb_000009_500 Hb_000009_500 Hb_000291_090--Hb_000009_500 Hb_002006_040 Hb_002006_040 Hb_000291_090--Hb_002006_040 Hb_002960_080 Hb_002960_080 Hb_000291_090--Hb_002960_080 Hb_000260_640 Hb_000260_640 Hb_001054_030--Hb_000260_640 Hb_002253_080 Hb_002253_080 Hb_001054_030--Hb_002253_080 Hb_003729_030 Hb_003729_030 Hb_001054_030--Hb_003729_030 Hb_006117_080 Hb_006117_080 Hb_001054_030--Hb_006117_080 Hb_000321_150 Hb_000321_150 Hb_001054_030--Hb_000321_150 Hb_000170_150 Hb_000170_150 Hb_000453_060--Hb_000170_150 Hb_000166_130 Hb_000166_130 Hb_000453_060--Hb_000166_130 Hb_013399_070 Hb_013399_070 Hb_000453_060--Hb_013399_070 Hb_003058_060 Hb_003058_060 Hb_000453_060--Hb_003058_060 Hb_000656_380 Hb_000656_380 Hb_000453_060--Hb_000656_380 Hb_000236_410 Hb_000236_410 Hb_032808_030--Hb_000236_410 Hb_000213_120 Hb_000213_120 Hb_032808_030--Hb_000213_120 Hb_000925_140 Hb_000925_140 Hb_032808_030--Hb_000925_140 Hb_002662_020 Hb_002662_020 Hb_032808_030--Hb_002662_020 Hb_000105_040 Hb_000105_040 Hb_032808_030--Hb_000105_040 Hb_001105_160 Hb_001105_160 Hb_032808_030--Hb_001105_160 Hb_011849_040 Hb_011849_040 Hb_000009_500--Hb_011849_040 Hb_000402_230 Hb_000402_230 Hb_000009_500--Hb_000402_230 Hb_079326_020 Hb_079326_020 Hb_000009_500--Hb_079326_020 Hb_002026_210 Hb_002026_210 Hb_000009_500--Hb_002026_210 Hb_004109_230 Hb_004109_230 Hb_000009_500--Hb_004109_230 Hb_000614_210 Hb_000614_210 Hb_000009_500--Hb_000614_210 Hb_000976_210 Hb_000976_210 Hb_002006_040--Hb_000976_210 Hb_002043_140 Hb_002043_140 Hb_002006_040--Hb_002043_140 Hb_023226_080 Hb_023226_080 Hb_002006_040--Hb_023226_080 Hb_002006_040--Hb_003729_030 Hb_002006_040--Hb_000402_230 Hb_009615_170 Hb_009615_170 Hb_002006_040--Hb_009615_170 Hb_043362_010 Hb_043362_010 Hb_002960_080--Hb_043362_010 Hb_002960_080--Hb_079326_020 Hb_002960_080--Hb_011849_040 Hb_000069_470 Hb_000069_470 Hb_002960_080--Hb_000069_470 Hb_001188_020 Hb_001188_020 Hb_002960_080--Hb_001188_020 Hb_003581_170 Hb_003581_170 Hb_002960_080--Hb_003581_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.72385 16.0009 4.62019 8.83903 9.20495 12.5824
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
5.26984 5.88822 7.20497 8.50899 5.75172

CAGE analysis