Hb_000291_210

Information

Type transcription factor
Description TF Family: bZIP
Location Contig291: 187715-188887
Sequence    

Annotation

kegg
ID rcu:RCOM_1033280
description DNA binding protein, putative
nr
ID XP_002513853.1
description DNA binding protein, putative [Ricinus communis]
swissprot
ID Q9LES3
description ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1
trembl
ID B9RJD4
description DNA binding protein, putative OS=Ricinus communis GN=RCOM_1033280 PE=4 SV=1
Gene Ontology
ID GO:0003700
description abscisic acid-insensitive 5-like protein 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000291_210 0.0 transcription factor TF Family: bZIP DNA binding protein, putative [Ricinus communis]
2 Hb_000008_250 0.1080505522 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000436_050 0.113462465 - - PREDICTED: INO80 complex subunit C [Jatropha curcas]
4 Hb_006452_060 0.1179122386 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
5 Hb_002973_080 0.1189015039 - - PREDICTED: uncharacterized protein LOC105630313 [Jatropha curcas]
6 Hb_000634_100 0.1319837353 - - hypothetical protein PRUPE_ppa013350mg [Prunus persica]
7 Hb_000402_200 0.132844795 - - PREDICTED: uncharacterized protein LOC105644655 [Jatropha curcas]
8 Hb_005955_020 0.1363984821 - - ring finger containing protein, putative [Ricinus communis]
9 Hb_004108_050 0.1477002754 - - PREDICTED: elongation factor Tu, mitochondrial [Jatropha curcas]
10 Hb_010638_020 0.148409898 - - PREDICTED: uncharacterized protein LOC105638189 isoform X3 [Jatropha curcas]
11 Hb_001379_060 0.1506543324 - - PREDICTED: uncharacterized protein LOC105650815 isoform X1 [Jatropha curcas]
12 Hb_005333_130 0.1510806475 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004226_020 0.1551333509 - - -
14 Hb_000729_060 0.1556804378 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005333_040 0.1559816043 - - PREDICTED: dnaJ homolog subfamily C member 5 [Prunus mume]
16 Hb_000085_310 0.1561942198 - - hypothetical protein JCGZ_00974 [Jatropha curcas]
17 Hb_004884_220 0.1563081767 - - hypothetical protein 29 [Hevea brasiliensis]
18 Hb_001220_040 0.1582397959 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
19 Hb_000352_110 0.1583470929 - - DNA topoisomerase II, putative [Ricinus communis]
20 Hb_005357_150 0.159597907 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000291_210 Hb_000291_210 Hb_000008_250 Hb_000008_250 Hb_000291_210--Hb_000008_250 Hb_000436_050 Hb_000436_050 Hb_000291_210--Hb_000436_050 Hb_006452_060 Hb_006452_060 Hb_000291_210--Hb_006452_060 Hb_002973_080 Hb_002973_080 Hb_000291_210--Hb_002973_080 Hb_000634_100 Hb_000634_100 Hb_000291_210--Hb_000634_100 Hb_000402_200 Hb_000402_200 Hb_000291_210--Hb_000402_200 Hb_001538_110 Hb_001538_110 Hb_000008_250--Hb_001538_110 Hb_000008_250--Hb_000436_050 Hb_005955_020 Hb_005955_020 Hb_000008_250--Hb_005955_020 Hb_000008_250--Hb_000402_200 Hb_000008_250--Hb_000634_100 Hb_000436_050--Hb_000634_100 Hb_000056_340 Hb_000056_340 Hb_000436_050--Hb_000056_340 Hb_002205_080 Hb_002205_080 Hb_000436_050--Hb_002205_080 Hb_023386_080 Hb_023386_080 Hb_000436_050--Hb_023386_080 Hb_001220_040 Hb_001220_040 Hb_006452_060--Hb_001220_040 Hb_030620_010 Hb_030620_010 Hb_006452_060--Hb_030620_010 Hb_000085_310 Hb_000085_310 Hb_006452_060--Hb_000085_310 Hb_030982_040 Hb_030982_040 Hb_006452_060--Hb_030982_040 Hb_006452_060--Hb_000436_050 Hb_000025_200 Hb_000025_200 Hb_002973_080--Hb_000025_200 Hb_000352_110 Hb_000352_110 Hb_002973_080--Hb_000352_110 Hb_004970_200 Hb_004970_200 Hb_002973_080--Hb_004970_200 Hb_000001_020 Hb_000001_020 Hb_002973_080--Hb_000001_020 Hb_000107_390 Hb_000107_390 Hb_002973_080--Hb_000107_390 Hb_010638_020 Hb_010638_020 Hb_002973_080--Hb_010638_020 Hb_003376_120 Hb_003376_120 Hb_000634_100--Hb_003376_120 Hb_000634_100--Hb_023386_080 Hb_000329_040 Hb_000329_040 Hb_000634_100--Hb_000329_040 Hb_005333_130 Hb_005333_130 Hb_000634_100--Hb_005333_130 Hb_003408_030 Hb_003408_030 Hb_000634_100--Hb_003408_030 Hb_044662_070 Hb_044662_070 Hb_000634_100--Hb_044662_070 Hb_021068_050 Hb_021068_050 Hb_000402_200--Hb_021068_050 Hb_001439_120 Hb_001439_120 Hb_000402_200--Hb_001439_120 Hb_001143_170 Hb_001143_170 Hb_000402_200--Hb_001143_170 Hb_000402_200--Hb_010638_020 Hb_018790_060 Hb_018790_060 Hb_000402_200--Hb_018790_060 Hb_022216_020 Hb_022216_020 Hb_000402_200--Hb_022216_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.647655 0.141518 0.290581 0.169401 1.41028 0.360632
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.809546 1.10357 1.16787 0.119635 0.0865078

CAGE analysis