Hb_000291_320

Information

Type -
Description -
Location Contig291: 284382-290396
Sequence    

Annotation

kegg
ID rcu:RCOM_1401100
description Protein MLO, putative
nr
ID XP_002526372.1
description Protein MLO, putative [Ricinus communis]
swissprot
ID Q94KB7
description MLO-like protein 6 OS=Arabidopsis thaliana GN=MLO6 PE=2 SV=2
trembl
ID B9SK53
description MLO-like protein OS=Ricinus communis GN=MLO PE=3 SV=1
Gene Ontology
ID GO:0016021
description mlo-like protein 6

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000291_320 0.0 - - Protein MLO, putative [Ricinus communis]
2 Hb_114025_010 0.1405602715 - - hypothetical protein POPTR_0008s13520g [Populus trichocarpa]
3 Hb_008080_050 0.1602198199 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
4 Hb_001856_060 0.1622888325 - - serine/threonine protein kinase, putative [Ricinus communis]
5 Hb_006120_020 0.1703211036 - - -
6 Hb_000149_120 0.174202754 - - PREDICTED: uncharacterized protein LOC105642119 isoform X2 [Jatropha curcas]
7 Hb_002542_090 0.1842518188 - - Potassium transporter, putative [Ricinus communis]
8 Hb_002435_080 0.1843726674 - - conserved hypothetical protein [Ricinus communis]
9 Hb_002928_220 0.1857904253 - - serine/threonine-protein kinase cx32, putative [Ricinus communis]
10 Hb_002740_170 0.1860871005 - - PREDICTED: uncharacterized protein LOC105647357 [Jatropha curcas]
11 Hb_001675_230 0.1866998319 - - scab resistance family protein [Populus trichocarpa]
12 Hb_000412_060 0.1877705611 - - hypothetical protein JCGZ_18814 [Jatropha curcas]
13 Hb_040963_010 0.1917041589 - - PREDICTED: polyneuridine-aldehyde esterase-like [Populus euphratica]
14 Hb_024570_020 0.1979147152 transcription factor TF Family: MYB-related PREDICTED: transcription factor RAX2-like [Populus euphratica]
15 Hb_124385_010 0.1980511087 - - hypothetical protein JCGZ_13882 [Jatropha curcas]
16 Hb_001225_060 0.2054524627 - - BnaC03g58850D [Brassica napus]
17 Hb_006938_010 0.2096648006 transcription factor TF Family: MYB PREDICTED: transcription factor MYB3-like [Jatropha curcas]
18 Hb_001013_040 0.2110778001 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
19 Hb_006569_110 0.2158008313 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000177_120 0.2173178153 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000291_320 Hb_000291_320 Hb_114025_010 Hb_114025_010 Hb_000291_320--Hb_114025_010 Hb_008080_050 Hb_008080_050 Hb_000291_320--Hb_008080_050 Hb_001856_060 Hb_001856_060 Hb_000291_320--Hb_001856_060 Hb_006120_020 Hb_006120_020 Hb_000291_320--Hb_006120_020 Hb_000149_120 Hb_000149_120 Hb_000291_320--Hb_000149_120 Hb_002542_090 Hb_002542_090 Hb_000291_320--Hb_002542_090 Hb_114025_010--Hb_008080_050 Hb_114025_010--Hb_001856_060 Hb_001675_230 Hb_001675_230 Hb_114025_010--Hb_001675_230 Hb_114025_010--Hb_006120_020 Hb_002435_080 Hb_002435_080 Hb_114025_010--Hb_002435_080 Hb_008080_050--Hb_001856_060 Hb_008080_050--Hb_001675_230 Hb_000411_060 Hb_000411_060 Hb_008080_050--Hb_000411_060 Hb_008080_050--Hb_002542_090 Hb_001013_040 Hb_001013_040 Hb_008080_050--Hb_001013_040 Hb_001856_060--Hb_001013_040 Hb_001856_060--Hb_002435_080 Hb_001331_040 Hb_001331_040 Hb_001856_060--Hb_001331_040 Hb_001856_060--Hb_000411_060 Hb_006120_020--Hb_000149_120 Hb_006120_020--Hb_001675_230 Hb_002928_220 Hb_002928_220 Hb_006120_020--Hb_002928_220 Hb_005618_110 Hb_005618_110 Hb_006120_020--Hb_005618_110 Hb_006970_100 Hb_006970_100 Hb_006120_020--Hb_006970_100 Hb_040963_010 Hb_040963_010 Hb_000149_120--Hb_040963_010 Hb_000149_120--Hb_002928_220 Hb_007382_070 Hb_007382_070 Hb_000149_120--Hb_007382_070 Hb_024570_020 Hb_024570_020 Hb_000149_120--Hb_024570_020 Hb_000149_120--Hb_006970_100 Hb_006938_010 Hb_006938_010 Hb_002542_090--Hb_006938_010 Hb_005010_040 Hb_005010_040 Hb_002542_090--Hb_005010_040 Hb_002542_090--Hb_002928_220 Hb_002542_090--Hb_001331_040 Hb_000010_200 Hb_000010_200 Hb_002542_090--Hb_000010_200 Hb_002542_090--Hb_001856_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0586094 0.0329116 0 0 0.0107863
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.197368 0.041766

CAGE analysis