Hb_000295_120

Information

Type -
Description -
Location Contig295: 119169-120527
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000295_120 0.0 - - -
2 Hb_002875_080 0.1328806549 - - protein with unknown function [Ricinus communis]
3 Hb_001008_060 0.1392291056 - - PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Jatropha curcas]
4 Hb_004657_020 0.1461354497 - - rer1 protein, putative [Ricinus communis]
5 Hb_007617_050 0.1492264863 - - Isoflavone reductase, putative [Ricinus communis]
6 Hb_000389_060 0.1569531876 - - PREDICTED: synaptotagmin-3 isoform X1 [Jatropha curcas]
7 Hb_002685_020 0.1578561415 - - -
8 Hb_000484_020 0.1583102234 - - hypothetical protein CISIN_1g030884mg [Citrus sinensis]
9 Hb_001486_260 0.1593268482 - - PREDICTED: uncharacterized protein LOC105632604 [Jatropha curcas]
10 Hb_000995_040 0.1611837822 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000200_100 0.1619013985 - - hypothetical protein POPTR_0013s14810g, partial [Populus trichocarpa]
12 Hb_009711_030 0.1622665458 - - PREDICTED: uncharacterized protein LOC105647792 isoform X1 [Jatropha curcas]
13 Hb_004242_080 0.1623860355 - - PREDICTED: uncharacterized protein LOC105632857 [Jatropha curcas]
14 Hb_001143_170 0.1625652908 - - nucellin, putative [Ricinus communis]
15 Hb_009773_020 0.1629056026 - - PREDICTED: molybdopterin synthase sulfur carrier subunit [Jatropha curcas]
16 Hb_034350_010 0.1638827041 - - PREDICTED: TMV resistance protein N-like isoform X2 [Populus euphratica]
17 Hb_002571_020 0.1639981848 - - PREDICTED: uncharacterized protein LOC105132457 isoform X12 [Populus euphratica]
18 Hb_003125_150 0.1641541198 - - PREDICTED: protein transport protein Sec61 subunit gamma [Jatropha curcas]
19 Hb_004102_190 0.164456574 - - PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase 1, chloroplastic isoform X1 [Populus euphratica]
20 Hb_033642_110 0.1654689719 - - PREDICTED: MLO-like protein 4 [Jatropha curcas]

Gene co-expression network

sample Hb_000295_120 Hb_000295_120 Hb_002875_080 Hb_002875_080 Hb_000295_120--Hb_002875_080 Hb_001008_060 Hb_001008_060 Hb_000295_120--Hb_001008_060 Hb_004657_020 Hb_004657_020 Hb_000295_120--Hb_004657_020 Hb_007617_050 Hb_007617_050 Hb_000295_120--Hb_007617_050 Hb_000389_060 Hb_000389_060 Hb_000295_120--Hb_000389_060 Hb_002685_020 Hb_002685_020 Hb_000295_120--Hb_002685_020 Hb_002875_080--Hb_001008_060 Hb_000001_050 Hb_000001_050 Hb_002875_080--Hb_000001_050 Hb_002875_080--Hb_000389_060 Hb_009773_020 Hb_009773_020 Hb_002875_080--Hb_009773_020 Hb_010931_090 Hb_010931_090 Hb_002875_080--Hb_010931_090 Hb_029866_040 Hb_029866_040 Hb_002875_080--Hb_029866_040 Hb_009711_030 Hb_009711_030 Hb_001008_060--Hb_009711_030 Hb_002078_450 Hb_002078_450 Hb_001008_060--Hb_002078_450 Hb_022250_040 Hb_022250_040 Hb_001008_060--Hb_022250_040 Hb_000085_320 Hb_000085_320 Hb_001008_060--Hb_000085_320 Hb_011794_070 Hb_011794_070 Hb_001008_060--Hb_011794_070 Hb_000703_140 Hb_000703_140 Hb_001008_060--Hb_000703_140 Hb_003052_100 Hb_003052_100 Hb_004657_020--Hb_003052_100 Hb_004657_020--Hb_002078_450 Hb_000371_080 Hb_000371_080 Hb_004657_020--Hb_000371_080 Hb_004657_020--Hb_009711_030 Hb_001195_690 Hb_001195_690 Hb_004657_020--Hb_001195_690 Hb_005686_110 Hb_005686_110 Hb_004657_020--Hb_005686_110 Hb_002890_140 Hb_002890_140 Hb_007617_050--Hb_002890_140 Hb_032717_080 Hb_032717_080 Hb_007617_050--Hb_032717_080 Hb_000116_440 Hb_000116_440 Hb_007617_050--Hb_000116_440 Hb_011310_190 Hb_011310_190 Hb_007617_050--Hb_011310_190 Hb_002105_090 Hb_002105_090 Hb_007617_050--Hb_002105_090 Hb_000103_090 Hb_000103_090 Hb_007617_050--Hb_000103_090 Hb_004102_190 Hb_004102_190 Hb_000389_060--Hb_004102_190 Hb_001486_260 Hb_001486_260 Hb_000389_060--Hb_001486_260 Hb_001104_120 Hb_001104_120 Hb_000389_060--Hb_001104_120 Hb_092272_020 Hb_092272_020 Hb_000389_060--Hb_092272_020 Hb_000061_480 Hb_000061_480 Hb_000389_060--Hb_000061_480 Hb_026527_030 Hb_026527_030 Hb_002685_020--Hb_026527_030 Hb_002216_040 Hb_002216_040 Hb_002685_020--Hb_002216_040 Hb_019253_020 Hb_019253_020 Hb_002685_020--Hb_019253_020 Hb_004678_050 Hb_004678_050 Hb_002685_020--Hb_004678_050 Hb_000300_640 Hb_000300_640 Hb_002685_020--Hb_000300_640 Hb_002685_020--Hb_000116_440
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.12825 0.382153 0.136928 2.51439 2.01021 1.74338
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.29919 4.53513 2.06224 1.6019 0.282946

CAGE analysis