Hb_000297_210

Information

Type -
Description -
Location Contig297: 226779-234353
Sequence    

Annotation

kegg
ID rcu:RCOM_0293150
description Bipolar kinesin KRP-130, putative
nr
ID XP_002530335.1
description Bipolar kinesin KRP-130, putative [Ricinus communis]
swissprot
ID O23826
description 125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1
trembl
ID B9SWG6
description Kinesin-like protein OS=Ricinus communis GN=RCOM_0293150 PE=3 SV=1
Gene Ontology
ID GO:0005871
description 125 kda kinesin-related protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31112: 229602-232503 , PASA_asmbl_31113: 232737-234385
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000297_210 0.0 - - Bipolar kinesin KRP-130, putative [Ricinus communis]
2 Hb_004122_010 0.0820815603 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
3 Hb_005181_170 0.0893036723 - - PREDICTED: aldehyde dehydrogenase 22A1 [Jatropha curcas]
4 Hb_007632_160 0.0964871038 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001348_100 0.1012809829 - - PREDICTED: uncharacterized protein LOC105638934 [Jatropha curcas]
6 Hb_005675_050 0.1041587238 - - alpha-glucosidase, putative [Ricinus communis]
7 Hb_005276_190 0.107572799 - - PREDICTED: uncharacterized protein LOC105650003 isoform X2 [Jatropha curcas]
8 Hb_002045_010 0.1090717098 - - PREDICTED: F-box/LRR-repeat protein 17 [Jatropha curcas]
9 Hb_001514_030 0.1109146944 - - PREDICTED: cyclin-D3-3-like [Jatropha curcas]
10 Hb_011671_050 0.1117329269 - - PREDICTED: F-box protein At5g07670 [Jatropha curcas]
11 Hb_000739_170 0.111766117 - - PREDICTED: 65-kDa microtubule-associated protein 4 [Jatropha curcas]
12 Hb_005305_160 0.1151341049 - - conserved hypothetical protein [Ricinus communis]
13 Hb_062807_010 0.1167391348 - - hypothetical protein JCGZ_15896 [Jatropha curcas]
14 Hb_000418_110 0.1178525099 - - PREDICTED: protein kinase PINOID [Jatropha curcas]
15 Hb_004037_040 0.1203592257 - - PREDICTED: putative glucose-6-phosphate 1-epimerase [Jatropha curcas]
16 Hb_001053_170 0.1211177505 - - PREDICTED: uncharacterized protein LOC105628694 [Jatropha curcas]
17 Hb_000077_300 0.1216202233 - - PREDICTED: expansin-B3-like [Jatropha curcas]
18 Hb_000187_050 0.1217852526 - - PREDICTED: uncharacterized protein LOC105650800 [Jatropha curcas]
19 Hb_000261_550 0.1220079428 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Jatropha curcas]
20 Hb_000260_380 0.1252981748 - - PREDICTED: cell division control protein 2 homolog C [Jatropha curcas]

Gene co-expression network

sample Hb_000297_210 Hb_000297_210 Hb_004122_010 Hb_004122_010 Hb_000297_210--Hb_004122_010 Hb_005181_170 Hb_005181_170 Hb_000297_210--Hb_005181_170 Hb_007632_160 Hb_007632_160 Hb_000297_210--Hb_007632_160 Hb_001348_100 Hb_001348_100 Hb_000297_210--Hb_001348_100 Hb_005675_050 Hb_005675_050 Hb_000297_210--Hb_005675_050 Hb_005276_190 Hb_005276_190 Hb_000297_210--Hb_005276_190 Hb_004122_010--Hb_005675_050 Hb_001514_030 Hb_001514_030 Hb_004122_010--Hb_001514_030 Hb_004122_010--Hb_007632_160 Hb_168918_010 Hb_168918_010 Hb_004122_010--Hb_168918_010 Hb_004122_010--Hb_005181_170 Hb_000112_080 Hb_000112_080 Hb_005181_170--Hb_000112_080 Hb_007218_040 Hb_007218_040 Hb_005181_170--Hb_007218_040 Hb_001140_300 Hb_001140_300 Hb_005181_170--Hb_001140_300 Hb_001396_030 Hb_001396_030 Hb_005181_170--Hb_001396_030 Hb_001157_050 Hb_001157_050 Hb_007632_160--Hb_001157_050 Hb_000418_110 Hb_000418_110 Hb_007632_160--Hb_000418_110 Hb_000120_340 Hb_000120_340 Hb_007632_160--Hb_000120_340 Hb_000086_470 Hb_000086_470 Hb_007632_160--Hb_000086_470 Hb_007632_160--Hb_005675_050 Hb_000522_160 Hb_000522_160 Hb_001348_100--Hb_000522_160 Hb_006693_010 Hb_006693_010 Hb_001348_100--Hb_006693_010 Hb_159809_040 Hb_159809_040 Hb_001348_100--Hb_159809_040 Hb_000538_290 Hb_000538_290 Hb_001348_100--Hb_000538_290 Hb_006810_040 Hb_006810_040 Hb_001348_100--Hb_006810_040 Hb_003666_070 Hb_003666_070 Hb_005675_050--Hb_003666_070 Hb_000739_170 Hb_000739_170 Hb_005675_050--Hb_000739_170 Hb_003097_130 Hb_003097_130 Hb_005675_050--Hb_003097_130 Hb_000418_170 Hb_000418_170 Hb_005675_050--Hb_000418_170 Hb_002053_100 Hb_002053_100 Hb_005276_190--Hb_002053_100 Hb_000830_010 Hb_000830_010 Hb_005276_190--Hb_000830_010 Hb_001439_240 Hb_001439_240 Hb_005276_190--Hb_001439_240 Hb_001349_050 Hb_001349_050 Hb_005276_190--Hb_001349_050 Hb_000576_140 Hb_000576_140 Hb_005276_190--Hb_000576_140 Hb_002203_010 Hb_002203_010 Hb_005276_190--Hb_002203_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0893308 3.11852 2.43101 0 0.00550338
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0270366 0.010638 0 0.493476 1.0453

CAGE analysis