Hb_000300_630

Information

Type -
Description -
Location Contig300: 578061-585737
Sequence    

Annotation

kegg
ID rcu:RCOM_1120970
description hypothetical protein
nr
ID XP_012070440.1
description PREDICTED: 5'-adenylylsulfate reductase-like 7 [Jatropha curcas]
swissprot
ID Q93YX4
description 5'-adenylylsulfate reductase-like 5 OS=Arabidopsis thaliana GN=APRL5 PE=2 SV=1
trembl
ID A0A067L6J5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02714 PE=4 SV=1
Gene Ontology
ID GO:0005623
description 5 -adenylylsulfate reductase-like 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31633: 578097-585816 , PASA_asmbl_31635: 582375-582664
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000300_630 0.0 - - PREDICTED: 5'-adenylylsulfate reductase-like 7 [Jatropha curcas]
2 Hb_006618_120 0.0632317623 - - PREDICTED: uncharacterized protein LOC105645969 [Jatropha curcas]
3 Hb_004627_040 0.0685686876 - - hypothetical protein POPTR_0010s22770g [Populus trichocarpa]
4 Hb_005023_010 0.0761183043 - - PREDICTED: putative lipase ROG1 [Jatropha curcas]
5 Hb_001018_110 0.0763491738 - - unnamed protein product [Coffea canephora]
6 Hb_001699_100 0.0853291487 - - PREDICTED: calmodulin-lysine N-methyltransferase [Jatropha curcas]
7 Hb_001633_130 0.0866085829 - - PREDICTED: uncharacterized protein LOC105630200 [Jatropha curcas]
8 Hb_072922_010 0.0871044317 - - apolipoprotein d, putative [Ricinus communis]
9 Hb_030736_020 0.087226515 - - conserved hypothetical protein [Ricinus communis]
10 Hb_004129_140 0.0925016956 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g06470 [Jatropha curcas]
11 Hb_000141_080 0.0927017932 - - PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial isoform X1 [Brassica rapa]
12 Hb_001159_130 0.0929539859 - - PREDICTED: protein cornichon homolog 4 [Jatropha curcas]
13 Hb_003502_090 0.0933142137 - - ATP synthase subunit d, putative [Ricinus communis]
14 Hb_086085_020 0.0939648786 - - Non-imprinted in Prader-Willi/Angelman syndrome region protein isoform 3 [Theobroma cacao]
15 Hb_002304_040 0.0940172912 - - PREDICTED: uncharacterized protein LOC105649623 isoform X2 [Jatropha curcas]
16 Hb_002298_030 0.0953420137 - - PREDICTED: coenzyme Q-binding protein COQ10 homolog, mitochondrial [Jatropha curcas]
17 Hb_008246_060 0.0968161351 - - hypothetical protein F383_01577 [Gossypium arboreum]
18 Hb_000146_040 0.0970985857 - - PREDICTED: reticulon-like protein B11 [Jatropha curcas]
19 Hb_003529_030 0.0983092059 - - Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative [Ricinus communis]
20 Hb_002053_140 0.0985720736 - - PREDICTED: coatomer subunit epsilon-1 [Jatropha curcas]

Gene co-expression network

sample Hb_000300_630 Hb_000300_630 Hb_006618_120 Hb_006618_120 Hb_000300_630--Hb_006618_120 Hb_004627_040 Hb_004627_040 Hb_000300_630--Hb_004627_040 Hb_005023_010 Hb_005023_010 Hb_000300_630--Hb_005023_010 Hb_001018_110 Hb_001018_110 Hb_000300_630--Hb_001018_110 Hb_001699_100 Hb_001699_100 Hb_000300_630--Hb_001699_100 Hb_001633_130 Hb_001633_130 Hb_000300_630--Hb_001633_130 Hb_002298_030 Hb_002298_030 Hb_006618_120--Hb_002298_030 Hb_006618_120--Hb_004627_040 Hb_008246_060 Hb_008246_060 Hb_006618_120--Hb_008246_060 Hb_013575_010 Hb_013575_010 Hb_006618_120--Hb_013575_010 Hb_000116_270 Hb_000116_270 Hb_006618_120--Hb_000116_270 Hb_004627_040--Hb_013575_010 Hb_030736_020 Hb_030736_020 Hb_004627_040--Hb_030736_020 Hb_004990_010 Hb_004990_010 Hb_004627_040--Hb_004990_010 Hb_004627_040--Hb_008246_060 Hb_090051_030 Hb_090051_030 Hb_005023_010--Hb_090051_030 Hb_001018_130 Hb_001018_130 Hb_005023_010--Hb_001018_130 Hb_005023_010--Hb_001018_110 Hb_005023_010--Hb_001633_130 Hb_000146_050 Hb_000146_050 Hb_005023_010--Hb_000146_050 Hb_001018_110--Hb_001018_130 Hb_044736_010 Hb_044736_010 Hb_001018_110--Hb_044736_010 Hb_003994_280 Hb_003994_280 Hb_001018_110--Hb_003994_280 Hb_072922_010 Hb_072922_010 Hb_001018_110--Hb_072922_010 Hb_000453_160 Hb_000453_160 Hb_001699_100--Hb_000453_160 Hb_002053_140 Hb_002053_140 Hb_001699_100--Hb_002053_140 Hb_012796_020 Hb_012796_020 Hb_001699_100--Hb_012796_020 Hb_000025_630 Hb_000025_630 Hb_001699_100--Hb_000025_630 Hb_007441_190 Hb_007441_190 Hb_001699_100--Hb_007441_190 Hb_082821_010 Hb_082821_010 Hb_001633_130--Hb_082821_010 Hb_001633_130--Hb_090051_030 Hb_001633_130--Hb_000146_050 Hb_006455_120 Hb_006455_120 Hb_001633_130--Hb_006455_120 Hb_001159_130 Hb_001159_130 Hb_001633_130--Hb_001159_130 Hb_003177_030 Hb_003177_030 Hb_001633_130--Hb_003177_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.0079 9.70219 10.1502 32.8342 13.75 18.249
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.4405 17.9225 18.8722 10.2115 12.4872

CAGE analysis