Hb_000302_060

Information

Type -
Description -
Location Contig302: 62146-62820
Sequence    

Annotation

kegg
ID vvi:100247310
description anthocyanidin 5,3-O-glucosyltransferase-like
nr
ID CBI22618.3
description unnamed protein product [Vitis vinifera]
swissprot
ID Q4R1I9
description Anthocyanidin 5,3-O-glucosyltransferase OS=Rosa hybrid cultivar GN=RhGT1 PE=2 SV=1
trembl
ID A0A067JQG0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26036 PE=3 SV=1
Gene Ontology
ID GO:0016757
description udp-glycosyltransferase 88a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000302_060 0.0 - - unnamed protein product [Vitis vinifera]
2 Hb_002204_030 0.0278779727 - - PREDICTED: uncharacterized protein LOC105764710 isoform X3 [Gossypium raimondii]
3 Hb_009515_010 0.0411324941 transcription factor TF Family: HB hypothetical protein JCGZ_15302 [Jatropha curcas]
4 Hb_000141_230 0.0562301978 - - PREDICTED: 14 kDa proline-rich protein DC2.15-like [Camelina sativa]
5 Hb_002556_020 0.0566246221 - - hypothetical protein JCGZ_12588 [Jatropha curcas]
6 Hb_000951_030 0.0619483638 - - kinase, putative [Ricinus communis]
7 Hb_002475_020 0.0712387423 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Populus euphratica]
8 Hb_000608_080 0.0721608482 - - hypothetical protein JCGZ_22216 [Jatropha curcas]
9 Hb_000334_250 0.0749345015 - - Polygalacturonase precursor, putative [Ricinus communis]
10 Hb_003462_150 0.0752419266 - - PREDICTED: chitinase 1-like [Eucalyptus grandis]
11 Hb_005218_070 0.0763667412 transcription factor TF Family: MYB PREDICTED: transcription factor RAX3 isoform X2 [Populus euphratica]
12 Hb_004544_080 0.0780896714 - - lectin protein kinase [Populus trichocarpa]
13 Hb_005228_170 0.0911959897 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
14 Hb_002999_090 0.0921922814 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002081_040 0.0994290249 - - PREDICTED: nucleobase-ascorbate transporter 4 [Jatropha curcas]
16 Hb_166813_010 0.1204590182 - - hypothetical protein JCGZ_24970 [Jatropha curcas]
17 Hb_002671_110 0.1247593221 - - PREDICTED: remorin-like [Jatropha curcas]
18 Hb_000472_030 0.125697814 - - -
19 Hb_122574_020 0.1288597536 - - hypothetical protein JCGZ_24076 [Jatropha curcas]
20 Hb_161393_010 0.1305574723 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_000302_060 Hb_000302_060 Hb_002204_030 Hb_002204_030 Hb_000302_060--Hb_002204_030 Hb_009515_010 Hb_009515_010 Hb_000302_060--Hb_009515_010 Hb_000141_230 Hb_000141_230 Hb_000302_060--Hb_000141_230 Hb_002556_020 Hb_002556_020 Hb_000302_060--Hb_002556_020 Hb_000951_030 Hb_000951_030 Hb_000302_060--Hb_000951_030 Hb_002475_020 Hb_002475_020 Hb_000302_060--Hb_002475_020 Hb_002204_030--Hb_009515_010 Hb_000334_250 Hb_000334_250 Hb_002204_030--Hb_000334_250 Hb_002204_030--Hb_000951_030 Hb_005218_070 Hb_005218_070 Hb_002204_030--Hb_005218_070 Hb_002204_030--Hb_002556_020 Hb_009515_010--Hb_000334_250 Hb_009515_010--Hb_005218_070 Hb_000608_080 Hb_000608_080 Hb_009515_010--Hb_000608_080 Hb_009515_010--Hb_000141_230 Hb_003462_150 Hb_003462_150 Hb_000141_230--Hb_003462_150 Hb_004544_080 Hb_004544_080 Hb_000141_230--Hb_004544_080 Hb_000141_230--Hb_000608_080 Hb_002999_090 Hb_002999_090 Hb_000141_230--Hb_002999_090 Hb_000141_230--Hb_002556_020 Hb_002556_020--Hb_000951_030 Hb_002556_020--Hb_002999_090 Hb_002556_020--Hb_002475_020 Hb_002556_020--Hb_003462_150 Hb_122574_020 Hb_122574_020 Hb_000951_030--Hb_122574_020 Hb_000951_030--Hb_002475_020 Hb_000951_030--Hb_005218_070 Hb_002475_020--Hb_000141_230 Hb_002475_020--Hb_002999_090 Hb_002475_020--Hb_003462_150 Hb_002475_020--Hb_004544_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.815698 0 0.427009 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.4002 0

CAGE analysis