Hb_000302_170

Information

Type -
Description -
Location Contig302: 126605-131745
Sequence    

Annotation

kegg
ID rcu:RCOM_1581960
description heat shock protein binding protein, putative
nr
ID XP_012090168.1
description PREDICTED: dnaJ protein ERDJ2A-like [Jatropha curcas]
swissprot
ID Q0WT48
description DnaJ protein ERDJ2A OS=Arabidopsis thaliana GN=ERDJ2A PE=1 SV=1
trembl
ID A0A067JEJ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26043 PE=4 SV=1
Gene Ontology
ID GO:0005622
description dnaj protein erdj2a-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_31786: 126643-131677 , PASA_asmbl_31787: 126643-131677
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000302_170 0.0 - - PREDICTED: dnaJ protein ERDJ2A-like [Jatropha curcas]
2 Hb_005322_050 0.0492064697 - - hypothetical protein POPTR_0009s02400g [Populus trichocarpa]
3 Hb_000300_550 0.0634147302 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
4 Hb_010287_030 0.0684082402 - - conserved hypothetical protein [Ricinus communis]
5 Hb_102438_030 0.0722989449 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 37-like isoform X1 [Jatropha curcas]
6 Hb_000102_050 0.072395918 transcription factor TF Family: RB conserved hypothetical protein [Ricinus communis]
7 Hb_152910_010 0.0738884634 - - PREDICTED: uncharacterized protein LOC105632212 [Jatropha curcas]
8 Hb_002092_070 0.0741005228 - - PREDICTED: aluminum-activated malate transporter 9-like [Jatropha curcas]
9 Hb_172257_010 0.0758117675 transcription factor TF Family: HMG high mobility group family protein [Populus trichocarpa]
10 Hb_000958_150 0.0762056257 - - Actin, putative [Ricinus communis]
11 Hb_000994_020 0.0770470151 - - methylenetetrahydrofolate dehydrogenase, putative [Ricinus communis]
12 Hb_000529_060 0.0783879322 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 isoform X1 [Jatropha curcas]
13 Hb_030545_030 0.0796045454 - - PREDICTED: uncharacterized protein LOC105648743 [Jatropha curcas]
14 Hb_006573_160 0.0807797694 - - PREDICTED: dnaJ protein ERDJ2A-like [Jatropha curcas]
15 Hb_027654_020 0.0811220589 - - PREDICTED: LIMR family protein At5g01460 [Jatropha curcas]
16 Hb_008165_030 0.0828338952 - - PREDICTED: uncharacterized protein LOC105641288 [Jatropha curcas]
17 Hb_002284_170 0.0871790221 - - PREDICTED: serine/threonine-protein kinase/endoribonuclease IRE1b [Jatropha curcas]
18 Hb_000580_030 0.0874918157 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
19 Hb_011920_020 0.0875144843 - - PREDICTED: uncharacterized protein LOC105645397 [Jatropha curcas]
20 Hb_002903_140 0.0878574773 - - PREDICTED: uncharacterized protein LOC105649513 [Jatropha curcas]

Gene co-expression network

sample Hb_000302_170 Hb_000302_170 Hb_005322_050 Hb_005322_050 Hb_000302_170--Hb_005322_050 Hb_000300_550 Hb_000300_550 Hb_000302_170--Hb_000300_550 Hb_010287_030 Hb_010287_030 Hb_000302_170--Hb_010287_030 Hb_102438_030 Hb_102438_030 Hb_000302_170--Hb_102438_030 Hb_000102_050 Hb_000102_050 Hb_000302_170--Hb_000102_050 Hb_152910_010 Hb_152910_010 Hb_000302_170--Hb_152910_010 Hb_005322_050--Hb_000300_550 Hb_172257_010 Hb_172257_010 Hb_005322_050--Hb_172257_010 Hb_007163_060 Hb_007163_060 Hb_005322_050--Hb_007163_060 Hb_000958_080 Hb_000958_080 Hb_005322_050--Hb_000958_080 Hb_027654_020 Hb_027654_020 Hb_005322_050--Hb_027654_020 Hb_006022_010 Hb_006022_010 Hb_000300_550--Hb_006022_010 Hb_000300_550--Hb_027654_020 Hb_000300_550--Hb_172257_010 Hb_000640_190 Hb_000640_190 Hb_000300_550--Hb_000640_190 Hb_004724_370 Hb_004724_370 Hb_010287_030--Hb_004724_370 Hb_008165_030 Hb_008165_030 Hb_010287_030--Hb_008165_030 Hb_001674_040 Hb_001674_040 Hb_010287_030--Hb_001674_040 Hb_030545_030 Hb_030545_030 Hb_010287_030--Hb_030545_030 Hb_006573_160 Hb_006573_160 Hb_010287_030--Hb_006573_160 Hb_102438_030--Hb_030545_030 Hb_102438_030--Hb_000102_050 Hb_004032_230 Hb_004032_230 Hb_102438_030--Hb_004032_230 Hb_007017_070 Hb_007017_070 Hb_102438_030--Hb_007017_070 Hb_000958_150 Hb_000958_150 Hb_102438_030--Hb_000958_150 Hb_000139_320 Hb_000139_320 Hb_102438_030--Hb_000139_320 Hb_000102_050--Hb_004032_230 Hb_000340_030 Hb_000340_030 Hb_000102_050--Hb_000340_030 Hb_000529_060 Hb_000529_060 Hb_000102_050--Hb_000529_060 Hb_005333_140 Hb_005333_140 Hb_000102_050--Hb_005333_140 Hb_152910_010--Hb_172257_010 Hb_152910_010--Hb_030545_030 Hb_004319_050 Hb_004319_050 Hb_152910_010--Hb_004319_050 Hb_152910_010--Hb_000300_550 Hb_152910_010--Hb_000640_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
38.1575 60.4012 58.5114 46.4953 41.4915 29.0892
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.8238 13.2076 11.4115 35.1365 25.9019

CAGE analysis