Hb_000302_310

Information

Type -
Description -
Location Contig302: 211198-216198
Sequence    

Annotation

kegg
ID pop:POPTR_0004s07200g
description POPTRDRAFT_198903; hypothetical protein
nr
ID XP_012090183.1
description PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]
swissprot
ID Q84WV9
description Glutaminyl-peptide cyclotransferase OS=Arabidopsis thaliana GN=QCT PE=1 SV=1
trembl
ID A0A067JQH7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26056 PE=4 SV=1
Gene Ontology
ID GO:0005886
description glutaminyl-peptide cyclotransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000302_310 0.0 - - PREDICTED: glutaminyl-peptide cyclotransferase-like [Jatropha curcas]
2 Hb_001214_060 0.0677920276 - - PREDICTED: phosphoinositide phosphatase SAC8 [Jatropha curcas]
3 Hb_002681_090 0.071816803 - - PREDICTED: golgin candidate 6 isoform X1 [Jatropha curcas]
4 Hb_001860_030 0.0723648924 - - PREDICTED: cleavage stimulation factor subunit 77 isoform X5 [Jatropha curcas]
5 Hb_000035_470 0.0743095458 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
6 Hb_004319_080 0.0749454962 - - PREDICTED: GPI ethanolamine phosphate transferase 1 [Jatropha curcas]
7 Hb_000163_220 0.0759008647 - - hypothetical protein CISIN_1g022301mg [Citrus sinensis]
8 Hb_000020_150 0.0760955125 - - PREDICTED: uncharacterized protein LOC105636325 [Jatropha curcas]
9 Hb_002073_190 0.0798136364 - - PREDICTED: uncharacterized protein LOC105649812 isoform X1 [Jatropha curcas]
10 Hb_028512_020 0.0801198279 - - PREDICTED: protein S-acyltransferase 11 isoform X2 [Jatropha curcas]
11 Hb_001040_100 0.081528564 - - PREDICTED: general transcription factor IIH subunit 4 [Jatropha curcas]
12 Hb_028872_090 0.081785887 - - PREDICTED: urease [Jatropha curcas]
13 Hb_000126_010 0.0821463786 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X1 [Jatropha curcas]
14 Hb_000260_330 0.0857174113 - - PREDICTED: uncharacterized protein LOC103438625 [Malus domestica]
15 Hb_001123_030 0.0858244398 - - ABC transporter family protein [Hevea brasiliensis]
16 Hb_005618_050 0.0859928233 - - PREDICTED: charged multivesicular body protein 7 isoform X1 [Jatropha curcas]
17 Hb_007657_020 0.0860525216 - - PREDICTED: PRA1 family protein H isoform X1 [Jatropha curcas]
18 Hb_006588_170 0.086409445 - - PREDICTED: OTU domain-containing protein At3g57810 [Jatropha curcas]
19 Hb_000640_170 0.0871577033 - - PREDICTED: uncharacterized protein LOC105642632 isoform X2 [Jatropha curcas]
20 Hb_000521_120 0.0879528196 - - PREDICTED: cyclic pyranopterin monophosphate synthase, mitochondrial isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000302_310 Hb_000302_310 Hb_001214_060 Hb_001214_060 Hb_000302_310--Hb_001214_060 Hb_002681_090 Hb_002681_090 Hb_000302_310--Hb_002681_090 Hb_001860_030 Hb_001860_030 Hb_000302_310--Hb_001860_030 Hb_000035_470 Hb_000035_470 Hb_000302_310--Hb_000035_470 Hb_004319_080 Hb_004319_080 Hb_000302_310--Hb_004319_080 Hb_000163_220 Hb_000163_220 Hb_000302_310--Hb_000163_220 Hb_033834_030 Hb_033834_030 Hb_001214_060--Hb_033834_030 Hb_005730_120 Hb_005730_120 Hb_001214_060--Hb_005730_120 Hb_000020_150 Hb_000020_150 Hb_001214_060--Hb_000020_150 Hb_001599_040 Hb_001599_040 Hb_001214_060--Hb_001599_040 Hb_002175_030 Hb_002175_030 Hb_001214_060--Hb_002175_030 Hb_007657_020 Hb_007657_020 Hb_002681_090--Hb_007657_020 Hb_002311_290 Hb_002311_290 Hb_002681_090--Hb_002311_290 Hb_000603_030 Hb_000603_030 Hb_002681_090--Hb_000603_030 Hb_000120_280 Hb_000120_280 Hb_002681_090--Hb_000120_280 Hb_002815_030 Hb_002815_030 Hb_002681_090--Hb_002815_030 Hb_000170_090 Hb_000170_090 Hb_002681_090--Hb_000170_090 Hb_000062_270 Hb_000062_270 Hb_001860_030--Hb_000062_270 Hb_028512_020 Hb_028512_020 Hb_001860_030--Hb_028512_020 Hb_013399_020 Hb_013399_020 Hb_001860_030--Hb_013399_020 Hb_000981_030 Hb_000981_030 Hb_001860_030--Hb_000981_030 Hb_004324_130 Hb_004324_130 Hb_001860_030--Hb_004324_130 Hb_001635_090 Hb_001635_090 Hb_001860_030--Hb_001635_090 Hb_000035_470--Hb_004319_080 Hb_015807_050 Hb_015807_050 Hb_000035_470--Hb_015807_050 Hb_001021_150 Hb_001021_150 Hb_000035_470--Hb_001021_150 Hb_168978_030 Hb_168978_030 Hb_000035_470--Hb_168978_030 Hb_002073_190 Hb_002073_190 Hb_000035_470--Hb_002073_190 Hb_000976_140 Hb_000976_140 Hb_000035_470--Hb_000976_140 Hb_000329_800 Hb_000329_800 Hb_004319_080--Hb_000329_800 Hb_001301_150 Hb_001301_150 Hb_004319_080--Hb_001301_150 Hb_001040_100 Hb_001040_100 Hb_004319_080--Hb_001040_100 Hb_003883_060 Hb_003883_060 Hb_004319_080--Hb_003883_060 Hb_000640_170 Hb_000640_170 Hb_004319_080--Hb_000640_170 Hb_106552_020 Hb_106552_020 Hb_000163_220--Hb_106552_020 Hb_005779_010 Hb_005779_010 Hb_000163_220--Hb_005779_010 Hb_028872_090 Hb_028872_090 Hb_000163_220--Hb_028872_090 Hb_005588_090 Hb_005588_090 Hb_000163_220--Hb_005588_090 Hb_005289_040 Hb_005289_040 Hb_000163_220--Hb_005289_040 Hb_002889_010 Hb_002889_010 Hb_000163_220--Hb_002889_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.12501 2.35683 3.25743 4.14323 3.49011 4.60257
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.27016 3.18263 1.49093 4.55652 2.21301

CAGE analysis