Hb_000308_030

Information

Type -
Description -
Location Contig308: 112441-120231
Sequence    

Annotation

kegg
ID rcu:RCOM_1407200
description hypothetical protein
nr
ID XP_012079208.1
description PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K725
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12373 PE=4 SV=1
Gene Ontology
ID GO:0005622
description PREDICTED: uncharacterized protein LOC105639686

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32528: 112649-117111
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000308_030 0.0 - - PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
2 Hb_005337_090 0.0637927854 - - PREDICTED: serine/threonine-protein kinase TOUSLED-like [Jatropha curcas]
3 Hb_000179_030 0.0660286543 - - PREDICTED: zinc finger protein VAR3, chloroplastic [Jatropha curcas]
4 Hb_000915_020 0.0668936443 - - unnamed protein product [Vitis vinifera]
5 Hb_008453_140 0.0677921759 - - PREDICTED: SKP1-like protein 1B [Jatropha curcas]
6 Hb_021576_100 0.0689905127 - - Enoyl-CoA hydratase, mitochondrial precursor, putative [Ricinus communis]
7 Hb_001926_030 0.0695219657 - - PREDICTED: apoptosis inhibitor 5 [Jatropha curcas]
8 Hb_001486_340 0.0701672492 - - PREDICTED: double-stranded RNA-binding protein 1-like [Jatropha curcas]
9 Hb_111198_010 0.0732258974 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 37-like isoform X1 [Jatropha curcas]
10 Hb_002686_250 0.0749310142 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 [Jatropha curcas]
11 Hb_183612_040 0.0750827564 - - PREDICTED: uncharacterized protein LOC105632370 [Jatropha curcas]
12 Hb_000030_190 0.0751279641 - - PREDICTED: TATA-box-binding protein-like isoform X1 [Citrus sinensis]
13 Hb_006355_010 0.0752024839 - - PREDICTED: protein NLRC3 [Jatropha curcas]
14 Hb_004586_140 0.0753988143 - - PREDICTED: uncharacterized protein LOC105630689 [Jatropha curcas]
15 Hb_000038_170 0.0754481122 - - PREDICTED: SCY1-like protein 2 [Jatropha curcas]
16 Hb_152175_010 0.0756542824 - - Protein grpE, putative [Ricinus communis]
17 Hb_002872_030 0.0758008161 - - PREDICTED: OTU domain-containing protein DDB_G0284757 [Jatropha curcas]
18 Hb_000291_060 0.0771647683 transcription factor TF Family: C2H2 PREDICTED: MYST-like histone acetyltransferase 2 [Jatropha curcas]
19 Hb_000302_270 0.0778860335 transcription factor TF Family: MYB-related DNA binding protein, putative [Ricinus communis]
20 Hb_007054_060 0.0781091692 - - -

Gene co-expression network

sample Hb_000308_030 Hb_000308_030 Hb_005337_090 Hb_005337_090 Hb_000308_030--Hb_005337_090 Hb_000179_030 Hb_000179_030 Hb_000308_030--Hb_000179_030 Hb_000915_020 Hb_000915_020 Hb_000308_030--Hb_000915_020 Hb_008453_140 Hb_008453_140 Hb_000308_030--Hb_008453_140 Hb_021576_100 Hb_021576_100 Hb_000308_030--Hb_021576_100 Hb_001926_030 Hb_001926_030 Hb_000308_030--Hb_001926_030 Hb_001089_110 Hb_001089_110 Hb_005337_090--Hb_001089_110 Hb_027428_010 Hb_027428_010 Hb_005337_090--Hb_027428_010 Hb_000005_220 Hb_000005_220 Hb_005337_090--Hb_000005_220 Hb_073973_130 Hb_073973_130 Hb_005337_090--Hb_073973_130 Hb_033834_030 Hb_033834_030 Hb_005337_090--Hb_033834_030 Hb_006355_010 Hb_006355_010 Hb_000179_030--Hb_006355_010 Hb_008159_020 Hb_008159_020 Hb_000179_030--Hb_008159_020 Hb_023386_040 Hb_023386_040 Hb_000179_030--Hb_023386_040 Hb_005914_060 Hb_005914_060 Hb_000179_030--Hb_005914_060 Hb_001486_340 Hb_001486_340 Hb_000179_030--Hb_001486_340 Hb_008246_040 Hb_008246_040 Hb_000915_020--Hb_008246_040 Hb_001409_020 Hb_001409_020 Hb_000915_020--Hb_001409_020 Hb_014497_050 Hb_014497_050 Hb_000915_020--Hb_014497_050 Hb_011671_430 Hb_011671_430 Hb_000915_020--Hb_011671_430 Hb_005993_050 Hb_005993_050 Hb_000915_020--Hb_005993_050 Hb_120410_010 Hb_120410_010 Hb_008453_140--Hb_120410_010 Hb_010381_090 Hb_010381_090 Hb_008453_140--Hb_010381_090 Hb_003125_120 Hb_003125_120 Hb_008453_140--Hb_003125_120 Hb_001142_030 Hb_001142_030 Hb_008453_140--Hb_001142_030 Hb_002872_030 Hb_002872_030 Hb_008453_140--Hb_002872_030 Hb_000220_010 Hb_000220_010 Hb_008453_140--Hb_000220_010 Hb_142368_010 Hb_142368_010 Hb_021576_100--Hb_142368_010 Hb_021576_100--Hb_005337_090 Hb_021576_100--Hb_073973_130 Hb_021576_100--Hb_000005_220 Hb_079526_030 Hb_079526_030 Hb_021576_100--Hb_079526_030 Hb_004055_150 Hb_004055_150 Hb_001926_030--Hb_004055_150 Hb_000879_200 Hb_000879_200 Hb_001926_030--Hb_000879_200 Hb_002686_250 Hb_002686_250 Hb_001926_030--Hb_002686_250 Hb_006620_020 Hb_006620_020 Hb_001926_030--Hb_006620_020 Hb_000853_230 Hb_000853_230 Hb_001926_030--Hb_000853_230 Hb_000010_400 Hb_000010_400 Hb_001926_030--Hb_000010_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
9.46134 9.63809 8.15833 5.32771 8.47039 10.1888
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.00608 8.13972 6.25674 6.36153 3.90463

CAGE analysis