Hb_000309_070

Information

Type -
Description -
Location Contig309: 75909-77900
Sequence    

Annotation

kegg
ID cmo:103489010
description 2-methylene-furan-3-one reductase
nr
ID XP_008446207.1
description PREDICTED: 2-methylene-furan-3-one reductase [Cucumis melo]
swissprot
ID Q9ZUC1
description Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=2 SV=2
trembl
ID E5GBJ6
description Alcohol dehydrogenase OS=Cucumis melo subsp. melo PE=4 SV=1
Gene Ontology
ID GO:0009570
description 2-methylene-furan-3-one reductase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32621: 76142-77688
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000309_070 0.0 - - PREDICTED: 2-methylene-furan-3-one reductase [Cucumis melo]
2 Hb_000392_490 0.074402043 - - PREDICTED: uncharacterized protein LOC105640495 isoform X1 [Jatropha curcas]
3 Hb_000963_120 0.0961524885 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
4 Hb_004374_030 0.1008759745 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
5 Hb_002119_110 0.1075593598 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28 [Jatropha curcas]
6 Hb_006992_010 0.1155977932 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
7 Hb_002374_510 0.1201259005 - - Esterase precursor, putative [Ricinus communis]
8 Hb_002095_020 0.120204105 - - PREDICTED: glutamate receptor 3.4-like isoform X1 [Jatropha curcas]
9 Hb_001629_050 0.1235642716 - - structural constituent of cell wall, putative [Ricinus communis]
10 Hb_003052_080 0.1245948699 desease resistance Gene Name: PRK PREDICTED: uridine-cytidine kinase C [Jatropha curcas]
11 Hb_004466_090 0.1265189455 - - conserved hypothetical protein [Ricinus communis]
12 Hb_001369_390 0.127173942 - - Glycerol-3-phosphate transporter, putative [Ricinus communis]
13 Hb_000836_030 0.1279798891 - - ubiquitin-conjugating enzyme h, putative [Ricinus communis]
14 Hb_000784_060 0.1281570058 - - conserved hypothetical protein [Ricinus communis]
15 Hb_002284_060 0.1302089448 - - sugar transporter, putative [Ricinus communis]
16 Hb_005329_030 0.1303668038 - - PREDICTED: NAD(P)H dehydrogenase (quinone) FQR1-like [Jatropha curcas]
17 Hb_002518_230 0.1304672486 - - -
18 Hb_026198_020 0.1305217845 - - PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]
19 Hb_002750_040 0.1327941497 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
20 Hb_012239_060 0.1329998949 - - PREDICTED: nudix hydrolase 18, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000309_070 Hb_000309_070 Hb_000392_490 Hb_000392_490 Hb_000309_070--Hb_000392_490 Hb_000963_120 Hb_000963_120 Hb_000309_070--Hb_000963_120 Hb_004374_030 Hb_004374_030 Hb_000309_070--Hb_004374_030 Hb_002119_110 Hb_002119_110 Hb_000309_070--Hb_002119_110 Hb_006992_010 Hb_006992_010 Hb_000309_070--Hb_006992_010 Hb_002374_510 Hb_002374_510 Hb_000309_070--Hb_002374_510 Hb_006916_140 Hb_006916_140 Hb_000392_490--Hb_006916_140 Hb_001629_050 Hb_001629_050 Hb_000392_490--Hb_001629_050 Hb_005329_030 Hb_005329_030 Hb_000392_490--Hb_005329_030 Hb_026198_020 Hb_026198_020 Hb_000392_490--Hb_026198_020 Hb_000392_490--Hb_000963_120 Hb_000963_120--Hb_002119_110 Hb_000963_120--Hb_004374_030 Hb_016277_030 Hb_016277_030 Hb_000963_120--Hb_016277_030 Hb_000963_120--Hb_006916_140 Hb_012239_060 Hb_012239_060 Hb_000963_120--Hb_012239_060 Hb_004374_030--Hb_016277_030 Hb_004466_090 Hb_004466_090 Hb_004374_030--Hb_004466_090 Hb_000784_060 Hb_000784_060 Hb_004374_030--Hb_000784_060 Hb_004374_030--Hb_002119_110 Hb_002095_020 Hb_002095_020 Hb_004374_030--Hb_002095_020 Hb_002119_110--Hb_016277_030 Hb_002119_110--Hb_000784_060 Hb_004032_190 Hb_004032_190 Hb_002119_110--Hb_004032_190 Hb_002119_110--Hb_012239_060 Hb_006992_010--Hb_000963_120 Hb_006992_010--Hb_004374_030 Hb_113766_010 Hb_113766_010 Hb_006992_010--Hb_113766_010 Hb_002391_240 Hb_002391_240 Hb_006992_010--Hb_002391_240 Hb_006992_010--Hb_026198_020 Hb_009122_010 Hb_009122_010 Hb_002374_510--Hb_009122_010 Hb_003371_280 Hb_003371_280 Hb_002374_510--Hb_003371_280 Hb_002374_510--Hb_113766_010 Hb_001269_660 Hb_001269_660 Hb_002374_510--Hb_001269_660 Hb_002370_020 Hb_002370_020 Hb_002374_510--Hb_002370_020 Hb_012395_060 Hb_012395_060 Hb_002374_510--Hb_012395_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.249042 8.08771 10.3715 46.1514 0.158172 0.0662631
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.844686 0.144453 0.323779 17.2419 50.2071

CAGE analysis