Hb_000310_040

Information

Type -
Description -
Location Contig310: 34853-40123
Sequence    

Annotation

kegg
ID tcc:TCM_016011
description Adenine phosphoribosyl transferase 4
nr
ID XP_012087148.1
description PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
swissprot
ID Q9SUW2
description Adenine phosphoribosyltransferase 3 OS=Arabidopsis thaliana GN=APT3 PE=1 SV=1
trembl
ID A0A067K1H8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20795 PE=3 SV=1
Gene Ontology
ID GO:0005737
description adenine phosphoribosyltransferase 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32813: 34786-39648
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000310_040 0.0 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
2 Hb_039075_010 0.0750909674 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
3 Hb_000333_140 0.0824597173 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
4 Hb_005211_170 0.0847986187 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
5 Hb_030360_010 0.0873562964 - - -
6 Hb_004732_070 0.0921942921 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000861_060 0.0954207118 - - PREDICTED: caffeic acid 3-O-methyltransferase-like [Jatropha curcas]
8 Hb_043552_010 0.0954227112 - - PREDICTED: pectinesterase/pectinesterase inhibitor PPE8B isoform X1 [Jatropha curcas]
9 Hb_000739_190 0.0975962466 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
10 Hb_016911_010 0.1012897379 - - hypothetical protein POPTR_0010s15010g [Populus trichocarpa]
11 Hb_002307_150 0.1015556018 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA4-like [Jatropha curcas]
12 Hb_011628_010 0.1029357195 - - tonoplast intrinsic protein, putative [Ricinus communis]
13 Hb_001136_080 0.107826502 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Jatropha curcas]
14 Hb_089040_010 0.1131148314 - - Glycosyl hydrolase family protein isoform 1 [Theobroma cacao]
15 Hb_002417_010 0.1137784577 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
16 Hb_004531_130 0.1149098645 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA27-like isoform X2 [Jatropha curcas]
17 Hb_050898_030 0.1155833607 - - conserved hypothetical protein [Ricinus communis]
18 Hb_015292_020 0.1184336646 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
19 Hb_000289_020 0.1194320937 - - hypothetical protein CICLE_v10009323mg [Citrus clementina]
20 Hb_009062_020 0.1194640206 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis melo]

Gene co-expression network

sample Hb_000310_040 Hb_000310_040 Hb_039075_010 Hb_039075_010 Hb_000310_040--Hb_039075_010 Hb_000333_140 Hb_000333_140 Hb_000310_040--Hb_000333_140 Hb_005211_170 Hb_005211_170 Hb_000310_040--Hb_005211_170 Hb_030360_010 Hb_030360_010 Hb_000310_040--Hb_030360_010 Hb_004732_070 Hb_004732_070 Hb_000310_040--Hb_004732_070 Hb_000861_060 Hb_000861_060 Hb_000310_040--Hb_000861_060 Hb_039075_010--Hb_030360_010 Hb_016911_010 Hb_016911_010 Hb_039075_010--Hb_016911_010 Hb_004112_080 Hb_004112_080 Hb_039075_010--Hb_004112_080 Hb_039075_010--Hb_000333_140 Hb_011628_010 Hb_011628_010 Hb_039075_010--Hb_011628_010 Hb_000333_140--Hb_011628_010 Hb_000333_140--Hb_005211_170 Hb_001136_080 Hb_001136_080 Hb_000333_140--Hb_001136_080 Hb_015292_020 Hb_015292_020 Hb_000333_140--Hb_015292_020 Hb_002307_150 Hb_002307_150 Hb_000333_140--Hb_002307_150 Hb_005211_170--Hb_002307_150 Hb_010080_050 Hb_010080_050 Hb_005211_170--Hb_010080_050 Hb_000445_260 Hb_000445_260 Hb_005211_170--Hb_000445_260 Hb_005211_170--Hb_011628_010 Hb_030360_010--Hb_004112_080 Hb_000739_190 Hb_000739_190 Hb_030360_010--Hb_000739_190 Hb_030360_010--Hb_011628_010 Hb_004705_060 Hb_004705_060 Hb_030360_010--Hb_004705_060 Hb_000190_160 Hb_000190_160 Hb_004732_070--Hb_000190_160 Hb_004732_070--Hb_039075_010 Hb_003777_150 Hb_003777_150 Hb_004732_070--Hb_003777_150 Hb_000270_050 Hb_000270_050 Hb_004732_070--Hb_000270_050 Hb_004732_070--Hb_030360_010 Hb_007426_190 Hb_007426_190 Hb_000861_060--Hb_007426_190 Hb_097292_010 Hb_097292_010 Hb_000861_060--Hb_097292_010 Hb_000227_300 Hb_000227_300 Hb_000861_060--Hb_000227_300 Hb_000586_110 Hb_000586_110 Hb_000861_060--Hb_000586_110 Hb_005731_040 Hb_005731_040 Hb_000861_060--Hb_005731_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0821406 1.32672 5.20083 10.7684 0.0340779 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.349296 0.910182

CAGE analysis