Hb_000311_040

Information

Type -
Description -
Location Contig311: 44668-50699
Sequence    

Annotation

kegg
ID rcu:RCOM_0893450
description Esterase D, putative (EC:3.1.1.1)
nr
ID XP_012086220.1
description PREDICTED: S-formylglutathione hydrolase [Jatropha curcas]
swissprot
ID Q8LAS8
description S-formylglutathione hydrolase OS=Arabidopsis thaliana GN=SFGH PE=1 SV=2
trembl
ID A0A067K1G1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21123 PE=4 SV=1
Gene Ontology
ID GO:0016788
description s-formylglutathione hydrolase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32942: 30135-50780
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000311_040 0.0 - - PREDICTED: S-formylglutathione hydrolase [Jatropha curcas]
2 Hb_001195_410 0.1662100924 - - PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase [Jatropha curcas]
3 Hb_034507_040 0.1744076606 - - peptide transporter, putative [Ricinus communis]
4 Hb_000816_190 0.1765002389 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000291_160 0.1816084189 - - PREDICTED: uncharacterized protein LOC105638863 [Jatropha curcas]
6 Hb_011918_010 0.181650119 - - hypothetical protein glysoja_041948 [Glycine soja]
7 Hb_008185_020 0.1816892385 - - RING-H2 finger protein ATL3J, putative [Ricinus communis]
8 Hb_001377_280 0.1832960786 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Populus euphratica]
9 Hb_002660_110 0.1836844878 - - PREDICTED: serine/threonine-protein kinase-like protein CCR1 isoform X1 [Jatropha curcas]
10 Hb_004125_070 0.1837372635 - - Glycolipid transfer protein, putative [Ricinus communis]
11 Hb_128473_010 0.18958802 - - -
12 Hb_122636_010 0.1906630056 - - dienelactone hydrolase family protein [Populus trichocarpa]
13 Hb_001999_100 0.1911646174 - - PREDICTED: UDP-glycosyltransferase 71D1-like [Jatropha curcas]
14 Hb_001217_010 0.1916824494 - - hypothetical protein JCGZ_04022 [Jatropha curcas]
15 Hb_004453_070 0.1940640552 transcription factor TF Family: CPP PREDICTED: CRC domain-containing protein TSO1-like isoform X1 [Jatropha curcas]
16 Hb_000311_030 0.1948846915 - - hypothetical protein B456_002G227600 [Gossypium raimondii]
17 Hb_002760_050 0.1949063219 - - conserved hypothetical protein [Ricinus communis]
18 Hb_006569_060 0.1960471264 - - plasma membrane intrinsic protein PIP2;3 [Hevea brasiliensis]
19 Hb_184541_010 0.1967982144 - - PREDICTED: selT-like protein [Jatropha curcas]
20 Hb_188313_010 0.1982548682 - - PREDICTED: LOW QUALITY PROTEIN: carboxymethylenebutenolidase homolog [Jatropha curcas]

Gene co-expression network

sample Hb_000311_040 Hb_000311_040 Hb_001195_410 Hb_001195_410 Hb_000311_040--Hb_001195_410 Hb_034507_040 Hb_034507_040 Hb_000311_040--Hb_034507_040 Hb_000816_190 Hb_000816_190 Hb_000311_040--Hb_000816_190 Hb_000291_160 Hb_000291_160 Hb_000311_040--Hb_000291_160 Hb_011918_010 Hb_011918_010 Hb_000311_040--Hb_011918_010 Hb_008185_020 Hb_008185_020 Hb_000311_040--Hb_008185_020 Hb_118507_010 Hb_118507_010 Hb_001195_410--Hb_118507_010 Hb_000008_190 Hb_000008_190 Hb_001195_410--Hb_000008_190 Hb_004453_070 Hb_004453_070 Hb_001195_410--Hb_004453_070 Hb_012760_050 Hb_012760_050 Hb_001195_410--Hb_012760_050 Hb_000172_510 Hb_000172_510 Hb_001195_410--Hb_000172_510 Hb_000776_060 Hb_000776_060 Hb_001195_410--Hb_000776_060 Hb_188313_010 Hb_188313_010 Hb_034507_040--Hb_188313_010 Hb_054865_160 Hb_054865_160 Hb_034507_040--Hb_054865_160 Hb_001217_010 Hb_001217_010 Hb_034507_040--Hb_001217_010 Hb_011287_040 Hb_011287_040 Hb_034507_040--Hb_011287_040 Hb_001247_030 Hb_001247_030 Hb_034507_040--Hb_001247_030 Hb_002490_030 Hb_002490_030 Hb_000816_190--Hb_002490_030 Hb_002900_100 Hb_002900_100 Hb_000816_190--Hb_002900_100 Hb_066514_010 Hb_066514_010 Hb_000816_190--Hb_066514_010 Hb_008119_030 Hb_008119_030 Hb_000816_190--Hb_008119_030 Hb_001366_170 Hb_001366_170 Hb_000816_190--Hb_001366_170 Hb_000816_190--Hb_011918_010 Hb_002660_110 Hb_002660_110 Hb_000291_160--Hb_002660_110 Hb_000739_200 Hb_000739_200 Hb_000291_160--Hb_000739_200 Hb_026740_020 Hb_026740_020 Hb_000291_160--Hb_026740_020 Hb_001999_100 Hb_001999_100 Hb_000291_160--Hb_001999_100 Hb_000291_160--Hb_001217_010 Hb_183610_010 Hb_183610_010 Hb_000291_160--Hb_183610_010 Hb_007575_090 Hb_007575_090 Hb_011918_010--Hb_007575_090 Hb_011918_010--Hb_066514_010 Hb_184541_010 Hb_184541_010 Hb_011918_010--Hb_184541_010 Hb_011918_010--Hb_002900_100 Hb_004125_070 Hb_004125_070 Hb_011918_010--Hb_004125_070 Hb_011918_010--Hb_002490_030 Hb_008185_020--Hb_184541_010 Hb_053709_040 Hb_053709_040 Hb_008185_020--Hb_053709_040 Hb_008185_020--Hb_001247_030 Hb_008185_020--Hb_004125_070 Hb_008185_020--Hb_011918_010 Hb_030992_010 Hb_030992_010 Hb_008185_020--Hb_030992_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
18.7375 12.2088 15.4071 130.215 6.02885 13.4359
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.5353 11.1888 8.08986 8.68437 7.85453

CAGE analysis