Hb_000312_100

Information

Type -
Description -
Location Contig312: 235345-238658
Sequence    

Annotation

kegg
ID cic:CICLE_v10017974mg
description hypothetical protein
nr
ID XP_012086336.1
description PREDICTED: septum-promoting GTP-binding protein 1-like [Jatropha curcas]
swissprot
ID P87027
description Septum-promoting GTP-binding protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spg1 PE=1 SV=1
trembl
ID A0A067K212
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22869 PE=4 SV=1
Gene Ontology
ID GO:0005622
description septum-promoting gtp-binding protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_32989: 235121-238079 , PASA_asmbl_32990: 238497-238786
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000312_100 0.0 - - PREDICTED: septum-promoting GTP-binding protein 1-like [Jatropha curcas]
2 Hb_001519_090 0.0653030602 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
3 Hb_023827_030 0.0827249541 - - PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like [Populus euphratica]
4 Hb_129956_010 0.0861377331 - - PREDICTED: serine/threonine-protein kinase SAPK2 [Eucalyptus grandis]
5 Hb_005276_140 0.0872668464 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000333_020 0.0908023246 - - PREDICTED: MOB kinase activator-like 1 [Jatropha curcas]
7 Hb_029695_090 0.0920598967 - - PREDICTED: probable inactive patatin-like protein 9 [Jatropha curcas]
8 Hb_000069_440 0.0943158582 - - PREDICTED: uncharacterized protein LOC105642861 [Jatropha curcas]
9 Hb_005488_210 0.0946343874 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
10 Hb_000881_020 0.0971720546 - - hypothetical protein MIMGU_mgv1a022110mg, partial [Erythranthe guttata]
11 Hb_000058_180 0.0976772104 - - PREDICTED: protein ECERIFERUM 3 [Jatropha curcas]
12 Hb_023582_010 0.0981986196 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004411_010 0.101487454 - - PREDICTED: NADP-dependent alkenal double bond reductase P2-like isoform X5 [Gossypium raimondii]
14 Hb_012098_100 0.1022305108 - - zinc finger protein, putative [Ricinus communis]
15 Hb_004223_150 0.1025206543 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Jatropha curcas]
16 Hb_016297_010 0.1028134998 - - PREDICTED: uncharacterized protein LOC105638665 [Jatropha curcas]
17 Hb_031321_020 0.1032391841 - - hypothetical protein POPTR_0003s15520g [Populus trichocarpa]
18 Hb_007681_010 0.1067205631 - - hypothetical protein RCOM_2128750 [Ricinus communis]
19 Hb_000005_060 0.1067534505 - - PREDICTED: uncharacterized protein At1g08160 [Jatropha curcas]
20 Hb_105148_020 0.1068825016 - - PREDICTED: lysosomal Pro-X carboxypeptidase [Jatropha curcas]

Gene co-expression network

sample Hb_000312_100 Hb_000312_100 Hb_001519_090 Hb_001519_090 Hb_000312_100--Hb_001519_090 Hb_023827_030 Hb_023827_030 Hb_000312_100--Hb_023827_030 Hb_129956_010 Hb_129956_010 Hb_000312_100--Hb_129956_010 Hb_005276_140 Hb_005276_140 Hb_000312_100--Hb_005276_140 Hb_000333_020 Hb_000333_020 Hb_000312_100--Hb_000333_020 Hb_029695_090 Hb_029695_090 Hb_000312_100--Hb_029695_090 Hb_003207_120 Hb_003207_120 Hb_001519_090--Hb_003207_120 Hb_001519_090--Hb_129956_010 Hb_001519_090--Hb_005276_140 Hb_000139_040 Hb_000139_040 Hb_001519_090--Hb_000139_040 Hb_001519_090--Hb_029695_090 Hb_000069_440 Hb_000069_440 Hb_023827_030--Hb_000069_440 Hb_016297_010 Hb_016297_010 Hb_023827_030--Hb_016297_010 Hb_000282_020 Hb_000282_020 Hb_023827_030--Hb_000282_020 Hb_019053_040 Hb_019053_040 Hb_023827_030--Hb_019053_040 Hb_023582_010 Hb_023582_010 Hb_023827_030--Hb_023582_010 Hb_105148_020 Hb_105148_020 Hb_023827_030--Hb_105148_020 Hb_129956_010--Hb_023827_030 Hb_129956_010--Hb_105148_020 Hb_049846_010 Hb_049846_010 Hb_129956_010--Hb_049846_010 Hb_006620_030 Hb_006620_030 Hb_129956_010--Hb_006620_030 Hb_129956_010--Hb_000139_040 Hb_000331_170 Hb_000331_170 Hb_005276_140--Hb_000331_170 Hb_132840_190 Hb_132840_190 Hb_005276_140--Hb_132840_190 Hb_000058_180 Hb_000058_180 Hb_005276_140--Hb_000058_180 Hb_007221_020 Hb_007221_020 Hb_005276_140--Hb_007221_020 Hb_000333_020--Hb_029695_090 Hb_000881_020 Hb_000881_020 Hb_000333_020--Hb_000881_020 Hb_004635_120 Hb_004635_120 Hb_000333_020--Hb_004635_120 Hb_012098_100 Hb_012098_100 Hb_000333_020--Hb_012098_100 Hb_000333_020--Hb_001519_090 Hb_000413_050 Hb_000413_050 Hb_029695_090--Hb_000413_050 Hb_004223_150 Hb_004223_150 Hb_029695_090--Hb_004223_150 Hb_000007_330 Hb_000007_330 Hb_029695_090--Hb_000007_330 Hb_011472_030 Hb_011472_030 Hb_029695_090--Hb_011472_030 Hb_012395_090 Hb_012395_090 Hb_029695_090--Hb_012395_090 Hb_029695_090--Hb_000881_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.336794 3.95025 2.20887 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.25003

CAGE analysis