Hb_000313_190

Information

Type -
Description -
Location Contig313: 273308-273844
Sequence    

Annotation

kegg
ID pop:POPTR_0008s12610g
description POPTRDRAFT_766120; hypothetical protein
nr
ID XP_012075683.1
description PREDICTED: uncharacterized protein LOC105636896 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KIY5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09271 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000313_190 0.0 - - PREDICTED: uncharacterized protein LOC105636896 [Jatropha curcas]
2 Hb_000529_050 0.0417153948 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
3 Hb_001477_080 0.080885403 - - hypothetical protein POPTR_0017s04860g [Populus trichocarpa]
4 Hb_000221_280 0.0819618073 - - PREDICTED: protein EXORDIUM-like [Populus euphratica]
5 Hb_000731_020 0.0881441771 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein ZAT10-like [Jatropha curcas]
6 Hb_003071_040 0.0908066939 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
7 Hb_004242_160 0.0975975532 transcription factor TF Family: GRAS PREDICTED: chitin-inducible gibberellin-responsive protein 1-like isoform X1 [Jatropha curcas]
8 Hb_002922_010 0.1006257995 - - heavy-metal-associated domain-containing family protein [Populus trichocarpa]
9 Hb_004586_120 0.1008548276 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]
10 Hb_000322_020 0.1079508308 - - PREDICTED: uncharacterized protein LOC105637914 [Jatropha curcas]
11 Hb_001098_020 0.1083022867 - - PREDICTED: transcription factor bHLH123-like isoform X1 [Populus euphratica]
12 Hb_125201_010 0.1114695337 - - hypothetical protein POPTR_0004s03690g [Populus trichocarpa]
13 Hb_032260_100 0.116387455 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]
14 Hb_041534_010 0.1167350849 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
15 Hb_001213_140 0.1172409747 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
16 Hb_005248_020 0.1173076207 - - hypothetical protein JCGZ_23770 [Jatropha curcas]
17 Hb_019978_010 0.1206666717 - - PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like isoform X2 [Jatropha curcas]
18 Hb_010417_120 0.1211053354 - - conserved hypothetical protein [Ricinus communis]
19 Hb_029622_080 0.1228263244 transcription factor TF Family: AP2 hypothetical protein JCGZ_26299 [Jatropha curcas]
20 Hb_001404_010 0.1228529757 - - hypothetical protein JCGZ_22818 [Jatropha curcas]

Gene co-expression network

sample Hb_000313_190 Hb_000313_190 Hb_000529_050 Hb_000529_050 Hb_000313_190--Hb_000529_050 Hb_001477_080 Hb_001477_080 Hb_000313_190--Hb_001477_080 Hb_000221_280 Hb_000221_280 Hb_000313_190--Hb_000221_280 Hb_000731_020 Hb_000731_020 Hb_000313_190--Hb_000731_020 Hb_003071_040 Hb_003071_040 Hb_000313_190--Hb_003071_040 Hb_004242_160 Hb_004242_160 Hb_000313_190--Hb_004242_160 Hb_000529_050--Hb_001477_080 Hb_000529_050--Hb_000221_280 Hb_004586_120 Hb_004586_120 Hb_000529_050--Hb_004586_120 Hb_000322_020 Hb_000322_020 Hb_000529_050--Hb_000322_020 Hb_032260_100 Hb_032260_100 Hb_000529_050--Hb_032260_100 Hb_001477_080--Hb_004242_160 Hb_002922_010 Hb_002922_010 Hb_001477_080--Hb_002922_010 Hb_001477_080--Hb_004586_120 Hb_001477_080--Hb_000322_020 Hb_000221_280--Hb_000731_020 Hb_001213_140 Hb_001213_140 Hb_000221_280--Hb_001213_140 Hb_029622_080 Hb_029622_080 Hb_000221_280--Hb_029622_080 Hb_000221_280--Hb_003071_040 Hb_019978_010 Hb_019978_010 Hb_000731_020--Hb_019978_010 Hb_006916_220 Hb_006916_220 Hb_000731_020--Hb_006916_220 Hb_004724_310 Hb_004724_310 Hb_000731_020--Hb_004724_310 Hb_000731_020--Hb_003071_040 Hb_001098_020 Hb_001098_020 Hb_003071_040--Hb_001098_020 Hb_098175_010 Hb_098175_010 Hb_003071_040--Hb_098175_010 Hb_010573_030 Hb_010573_030 Hb_003071_040--Hb_010573_030 Hb_003071_040--Hb_000529_050 Hb_010417_120 Hb_010417_120 Hb_004242_160--Hb_010417_120 Hb_001511_270 Hb_001511_270 Hb_004242_160--Hb_001511_270 Hb_004242_160--Hb_001098_020 Hb_004242_160--Hb_000529_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.424446 433.366 96.8233 151.096 0.103352 0.0458964
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.39312 3.76069 1.13036 2.05893 10.5257

CAGE analysis