Hb_000316_110

Information

Type -
Description -
Location Contig316: 72670-78796
Sequence    

Annotation

kegg
ID rcu:RCOM_1207110
description Dolichyl-phosphate beta-glucosyltransferase, putative (EC:2.4.1.117)
nr
ID XP_002530857.1
description Dolichyl-phosphate beta-glucosyltransferase, putative [Ricinus communis]
swissprot
ID Q9VLQ1
description Dolichyl-phosphate beta-glucosyltransferase OS=Drosophila melanogaster GN=wol PE=1 SV=1
trembl
ID B9SXX8
description Dolichyl-phosphate beta-glucosyltransferase, putative OS=Ricinus communis GN=RCOM_1207110 PE=4 SV=1
Gene Ontology
ID GO:0005783
description dolichyl-phosphate beta-glucosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33311: 72707-78800
cDNA
(Sanger)
(ID:Location)		 024_N04.ab1: 75322-78800 , 027_C06.ab1: 75305-78800

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000316_110 0.0 - - Dolichyl-phosphate beta-glucosyltransferase, putative [Ricinus communis]
2 Hb_006569_020 0.0623101487 - - hypothetical protein POPTR_0010s22990g [Populus trichocarpa]
3 Hb_007166_050 0.078700639 - - -
4 Hb_001019_090 0.0828919265 - - PREDICTED: uncharacterized protein LOC105639312 isoform X2 [Jatropha curcas]
5 Hb_009711_030 0.0834923805 - - PREDICTED: uncharacterized protein LOC105647792 isoform X1 [Jatropha curcas]
6 Hb_159558_030 0.0855860266 - - ubiquitin-conjugating enzyme E2 variant 1D [Jatropha curcas]
7 Hb_022250_040 0.085746699 - - PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Jatropha curcas]
8 Hb_000200_210 0.0865199714 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000500_130 0.0867218446 - - small GTPase [Hevea brasiliensis]
10 Hb_003125_040 0.087334707 - - PREDICTED: uncharacterized protein LOC105640201 isoform X1 [Jatropha curcas]
11 Hb_011931_050 0.0886446917 - - fk506-binding protein, putative [Ricinus communis]
12 Hb_001776_110 0.0899102739 - - PREDICTED: pentatricopeptide repeat-containing protein At1g07590, mitochondrial [Jatropha curcas]
13 Hb_001437_040 0.0899818207 - - PREDICTED: ATPase GET3-like [Vitis vinifera]
14 Hb_004204_030 0.0900576784 - - unknown [Populus trichocarpa]
15 Hb_004117_290 0.0901980587 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003086_110 0.0909303548 - - PREDICTED: dihydroneopterin aldolase-like isoform X2 [Prunus mume]
17 Hb_000723_090 0.0910767905 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000365_380 0.0921335615 - - conserved hypothetical protein [Ricinus communis]
19 Hb_001754_150 0.0922522378 - - PREDICTED: vesicle-associated membrane protein 724 [Jatropha curcas]
20 Hb_125000_010 0.0940432149 - - PREDICTED: protein SCO1 homolog 2, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000316_110 Hb_000316_110 Hb_006569_020 Hb_006569_020 Hb_000316_110--Hb_006569_020 Hb_007166_050 Hb_007166_050 Hb_000316_110--Hb_007166_050 Hb_001019_090 Hb_001019_090 Hb_000316_110--Hb_001019_090 Hb_009711_030 Hb_009711_030 Hb_000316_110--Hb_009711_030 Hb_159558_030 Hb_159558_030 Hb_000316_110--Hb_159558_030 Hb_022250_040 Hb_022250_040 Hb_000316_110--Hb_022250_040 Hb_006569_020--Hb_022250_040 Hb_001776_110 Hb_001776_110 Hb_006569_020--Hb_001776_110 Hb_001437_040 Hb_001437_040 Hb_006569_020--Hb_001437_040 Hb_006569_020--Hb_159558_030 Hb_004662_030 Hb_004662_030 Hb_006569_020--Hb_004662_030 Hb_003086_110 Hb_003086_110 Hb_007166_050--Hb_003086_110 Hb_000617_320 Hb_000617_320 Hb_007166_050--Hb_000617_320 Hb_007166_050--Hb_001019_090 Hb_118977_020 Hb_118977_020 Hb_007166_050--Hb_118977_020 Hb_007166_050--Hb_001437_040 Hb_004297_100 Hb_004297_100 Hb_001019_090--Hb_004297_100 Hb_001019_090--Hb_000617_320 Hb_000152_430 Hb_000152_430 Hb_001019_090--Hb_000152_430 Hb_001754_150 Hb_001754_150 Hb_001019_090--Hb_001754_150 Hb_000483_160 Hb_000483_160 Hb_001019_090--Hb_000483_160 Hb_009711_030--Hb_022250_040 Hb_125000_010 Hb_125000_010 Hb_009711_030--Hb_125000_010 Hb_000371_080 Hb_000371_080 Hb_009711_030--Hb_000371_080 Hb_001008_060 Hb_001008_060 Hb_009711_030--Hb_001008_060 Hb_001824_070 Hb_001824_070 Hb_009711_030--Hb_001824_070 Hb_002097_110 Hb_002097_110 Hb_009711_030--Hb_002097_110 Hb_000500_130 Hb_000500_130 Hb_159558_030--Hb_000500_130 Hb_002400_220 Hb_002400_220 Hb_159558_030--Hb_002400_220 Hb_000272_100 Hb_000272_100 Hb_159558_030--Hb_000272_100 Hb_158092_070 Hb_158092_070 Hb_159558_030--Hb_158092_070 Hb_002553_020 Hb_002553_020 Hb_159558_030--Hb_002553_020 Hb_022250_040--Hb_000371_080 Hb_002078_450 Hb_002078_450 Hb_022250_040--Hb_002078_450 Hb_022250_040--Hb_004662_030 Hb_002603_100 Hb_002603_100 Hb_022250_040--Hb_002603_100 Hb_022250_040--Hb_125000_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
79.32 7.69205 14.9734 23.7913 62.9757 75.7021
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
100.22 85.3605 41.6037 18.8357 10.2895

CAGE analysis