Hb_000316_130

Information

Type -
Description -
Location Contig316: 100710-101384
Sequence    

Annotation

kegg
ID rcu:RCOM_1207230
description hypothetical protein
nr
ID XP_012089268.1
description PREDICTED: uncharacterized protein LOC105647693 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LKT8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01459 PE=4 SV=1
Gene Ontology
ID GO:0006949
description PREDICTED: uncharacterized protein LOC105647693

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000316_130 0.0 - - PREDICTED: uncharacterized protein LOC105647693 [Jatropha curcas]
2 Hb_000012_430 0.1183104593 - - calcineurin B, putative [Ricinus communis]
3 Hb_032808_020 0.1325855459 - - PREDICTED: hypersensitive-induced response protein 2 [Nicotiana tomentosiformis]
4 Hb_000009_080 0.1334557613 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 15 [Jatropha curcas]
5 Hb_000307_140 0.1341202569 - - PREDICTED: 24-methylenesterol C-methyltransferase 2 [Jatropha curcas]
6 Hb_000670_050 0.134285798 transcription factor TF Family: MYB hypothetical protein JCGZ_16088 [Jatropha curcas]
7 Hb_000220_130 0.1354811508 - - Phosphatidyl serine synthase family protein isoform 1 [Theobroma cacao]
8 Hb_000127_130 0.1429084295 - - PREDICTED: uncharacterized protein LOC105635483 [Jatropha curcas]
9 Hb_000210_230 0.1429259216 - - PREDICTED: uncharacterized protein LOC105635819 [Jatropha curcas]
10 Hb_005147_100 0.1440739771 - - conserved hypothetical protein [Ricinus communis]
11 Hb_109092_010 0.1445136842 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
12 Hb_002217_240 0.1447323093 - - PREDICTED: F-box protein At5g49610 [Jatropha curcas]
13 Hb_032208_070 0.1480044328 - - PREDICTED: probable polyamine transporter At3g13620 isoform X2 [Jatropha curcas]
14 Hb_003893_030 0.1480948139 - - Protein yrdA, putative [Ricinus communis]
15 Hb_006816_350 0.149049757 - - PREDICTED: syntaxin-43 [Jatropha curcas]
16 Hb_000554_010 0.1495237566 - - transporter, putative [Ricinus communis]
17 Hb_000649_320 0.1499626357 - - PREDICTED: mediator of RNA polymerase II transcription subunit 23 isoform X2 [Jatropha curcas]
18 Hb_006018_040 0.1510345176 - - PREDICTED: probable E3 ubiquitin-protein ligase HIP1 [Jatropha curcas]
19 Hb_002671_140 0.1536446852 - - calcium-dependent protein kinase [Hevea brasiliensis]
20 Hb_002615_040 0.1546650019 - - PREDICTED: uncharacterized protein LOC105110770 [Populus euphratica]

Gene co-expression network

sample Hb_000316_130 Hb_000316_130 Hb_000012_430 Hb_000012_430 Hb_000316_130--Hb_000012_430 Hb_032808_020 Hb_032808_020 Hb_000316_130--Hb_032808_020 Hb_000009_080 Hb_000009_080 Hb_000316_130--Hb_000009_080 Hb_000307_140 Hb_000307_140 Hb_000316_130--Hb_000307_140 Hb_000670_050 Hb_000670_050 Hb_000316_130--Hb_000670_050 Hb_000220_130 Hb_000220_130 Hb_000316_130--Hb_000220_130 Hb_000230_200 Hb_000230_200 Hb_000012_430--Hb_000230_200 Hb_002681_050 Hb_002681_050 Hb_000012_430--Hb_002681_050 Hb_000768_170 Hb_000768_170 Hb_000012_430--Hb_000768_170 Hb_002529_060 Hb_002529_060 Hb_000012_430--Hb_002529_060 Hb_007904_200 Hb_007904_200 Hb_000012_430--Hb_007904_200 Hb_000085_180 Hb_000085_180 Hb_000012_430--Hb_000085_180 Hb_002141_030 Hb_002141_030 Hb_032808_020--Hb_002141_030 Hb_000787_050 Hb_000787_050 Hb_032808_020--Hb_000787_050 Hb_000059_330 Hb_000059_330 Hb_032808_020--Hb_000059_330 Hb_001662_070 Hb_001662_070 Hb_032808_020--Hb_001662_070 Hb_000251_070 Hb_000251_070 Hb_032808_020--Hb_000251_070 Hb_004934_110 Hb_004934_110 Hb_032808_020--Hb_004934_110 Hb_002046_190 Hb_002046_190 Hb_000009_080--Hb_002046_190 Hb_000512_060 Hb_000512_060 Hb_000009_080--Hb_000512_060 Hb_148025_010 Hb_148025_010 Hb_000009_080--Hb_148025_010 Hb_005686_060 Hb_005686_060 Hb_000009_080--Hb_005686_060 Hb_109092_010 Hb_109092_010 Hb_000009_080--Hb_109092_010 Hb_002835_080 Hb_002835_080 Hb_000009_080--Hb_002835_080 Hb_000307_140--Hb_000085_180 Hb_005725_080 Hb_005725_080 Hb_000307_140--Hb_005725_080 Hb_002188_130 Hb_002188_130 Hb_000307_140--Hb_002188_130 Hb_002774_060 Hb_002774_060 Hb_000307_140--Hb_002774_060 Hb_001269_680 Hb_001269_680 Hb_000307_140--Hb_001269_680 Hb_000442_150 Hb_000442_150 Hb_000307_140--Hb_000442_150 Hb_000146_050 Hb_000146_050 Hb_000670_050--Hb_000146_050 Hb_000982_060 Hb_000982_060 Hb_000670_050--Hb_000982_060 Hb_004473_040 Hb_004473_040 Hb_000670_050--Hb_004473_040 Hb_004310_020 Hb_004310_020 Hb_000670_050--Hb_004310_020 Hb_010712_030 Hb_010712_030 Hb_000670_050--Hb_010712_030 Hb_000060_040 Hb_000060_040 Hb_000670_050--Hb_000060_040 Hb_000141_040 Hb_000141_040 Hb_000220_130--Hb_000141_040 Hb_030736_080 Hb_030736_080 Hb_000220_130--Hb_030736_080 Hb_145880_030 Hb_145880_030 Hb_000220_130--Hb_145880_030 Hb_005147_100 Hb_005147_100 Hb_000220_130--Hb_005147_100 Hb_007778_030 Hb_007778_030 Hb_000220_130--Hb_007778_030 Hb_033594_110 Hb_033594_110 Hb_000220_130--Hb_033594_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
42.4979 22.2619 11.9132 37.3435 19.724 24.9183
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.7141 29.7816 19.8578 3.10935 14.8878

CAGE analysis