Hb_000317_290

Information

Type -
Description -
Location Contig317: 205798-206313
Sequence    

Annotation

kegg
ID cic:CICLE_v10026619mg
description hypothetical protein
nr
ID XP_012088377.1
description PREDICTED: VQ motif-containing protein 31 [Jatropha curcas]
swissprot
ID Q9FNP0
description VQ motif-containing protein 31 OS=Arabidopsis thaliana GN=VQ31 PE=1 SV=1
trembl
ID A0A067JK32
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25869 PE=4 SV=1
Gene Ontology
ID GO:0005634
description vq motif-containing protein 31

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000317_290 0.0 - - PREDICTED: VQ motif-containing protein 31 [Jatropha curcas]
2 Hb_004907_110 0.1045160763 - - PREDICTED: BTB/POZ and MATH domain-containing protein 3 isoform X1 [Jatropha curcas]
3 Hb_126643_020 0.1060186516 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1 [Jatropha curcas]
4 Hb_000049_310 0.1096569828 - - Myosin-J heavy chain, partial [Glycine soja]
5 Hb_005015_070 0.1108189919 - - PREDICTED: pentatricopeptide repeat-containing protein At4g39530 [Jatropha curcas]
6 Hb_003376_350 0.1110806496 - - PREDICTED: CASP-like protein 5A1 isoform X1 [Jatropha curcas]
7 Hb_000203_160 0.111658441 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL2-like [Jatropha curcas]
8 Hb_007426_180 0.1136856623 - - PREDICTED: probable inositol transporter 2 [Jatropha curcas]
9 Hb_012325_020 0.1142414983 - - PREDICTED: ATPase family AAA domain-containing protein At1g05910 isoform X1 [Jatropha curcas]
10 Hb_000317_280 0.1148748696 - - PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At5g08490 [Jatropha curcas]
11 Hb_002813_050 0.1154143956 desease resistance Gene Name: TIR_2 PREDICTED: uncharacterized protein LOC105635699 [Jatropha curcas]
12 Hb_000213_100 0.115984281 - - PREDICTED: pentatricopeptide repeat-containing protein At1g79540-like [Jatropha curcas]
13 Hb_004586_340 0.1166330187 - - PREDICTED: serine/threonine-protein kinase PEPKR2 [Jatropha curcas]
14 Hb_002110_150 0.1177806221 - - PREDICTED: serine/threonine-protein kinase PEPKR2 [Jatropha curcas]
15 Hb_000343_130 0.118065969 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor ASIL1-like [Jatropha curcas]
16 Hb_008725_260 0.1184953702 - - PREDICTED: uncharacterized protein LOC105642597 [Jatropha curcas]
17 Hb_000227_120 0.1196036378 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002518_140 0.1196372308 - - hypothetical protein JCGZ_18870 [Jatropha curcas]
19 Hb_000189_560 0.1197620377 transcription factor TF Family: GeBP PREDICTED: mediator-associated protein 1 [Jatropha curcas]
20 Hb_000307_030 0.1206050932 - - PREDICTED: pentatricopeptide repeat-containing protein At5g40410, mitochondrial [Jatropha curcas]

Gene co-expression network

sample Hb_000317_290 Hb_000317_290 Hb_004907_110 Hb_004907_110 Hb_000317_290--Hb_004907_110 Hb_126643_020 Hb_126643_020 Hb_000317_290--Hb_126643_020 Hb_000049_310 Hb_000049_310 Hb_000317_290--Hb_000049_310 Hb_005015_070 Hb_005015_070 Hb_000317_290--Hb_005015_070 Hb_003376_350 Hb_003376_350 Hb_000317_290--Hb_003376_350 Hb_000203_160 Hb_000203_160 Hb_000317_290--Hb_000203_160 Hb_000805_020 Hb_000805_020 Hb_004907_110--Hb_000805_020 Hb_007532_030 Hb_007532_030 Hb_004907_110--Hb_007532_030 Hb_008725_260 Hb_008725_260 Hb_004907_110--Hb_008725_260 Hb_031527_040 Hb_031527_040 Hb_004907_110--Hb_031527_040 Hb_000876_070 Hb_000876_070 Hb_004907_110--Hb_000876_070 Hb_002631_060 Hb_002631_060 Hb_004907_110--Hb_002631_060 Hb_126643_020--Hb_000203_160 Hb_002685_010 Hb_002685_010 Hb_126643_020--Hb_002685_010 Hb_002085_110 Hb_002085_110 Hb_126643_020--Hb_002085_110 Hb_002518_140 Hb_002518_140 Hb_126643_020--Hb_002518_140 Hb_005699_070 Hb_005699_070 Hb_126643_020--Hb_005699_070 Hb_004491_010 Hb_004491_010 Hb_126643_020--Hb_004491_010 Hb_000009_320 Hb_000009_320 Hb_000049_310--Hb_000009_320 Hb_001956_200 Hb_001956_200 Hb_000049_310--Hb_001956_200 Hb_000049_310--Hb_004907_110 Hb_000280_080 Hb_000280_080 Hb_000049_310--Hb_000280_080 Hb_000061_460 Hb_000061_460 Hb_000049_310--Hb_000061_460 Hb_012325_020 Hb_012325_020 Hb_000049_310--Hb_012325_020 Hb_000696_150 Hb_000696_150 Hb_005015_070--Hb_000696_150 Hb_004374_070 Hb_004374_070 Hb_005015_070--Hb_004374_070 Hb_010172_090 Hb_010172_090 Hb_005015_070--Hb_010172_090 Hb_001141_390 Hb_001141_390 Hb_005015_070--Hb_001141_390 Hb_000866_220 Hb_000866_220 Hb_005015_070--Hb_000866_220 Hb_048219_010 Hb_048219_010 Hb_005015_070--Hb_048219_010 Hb_003376_350--Hb_004907_110 Hb_003376_350--Hb_002631_060 Hb_000926_330 Hb_000926_330 Hb_003376_350--Hb_000926_330 Hb_004994_140 Hb_004994_140 Hb_003376_350--Hb_004994_140 Hb_000189_560 Hb_000189_560 Hb_003376_350--Hb_000189_560 Hb_003376_350--Hb_007532_030 Hb_004837_040 Hb_004837_040 Hb_000203_160--Hb_004837_040 Hb_000203_160--Hb_002685_010 Hb_000203_160--Hb_004907_110 Hb_000554_020 Hb_000554_020 Hb_000203_160--Hb_000554_020 Hb_002496_030 Hb_002496_030 Hb_000203_160--Hb_002496_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.48849 3.126 1.24566 0.522256 1.90581 1.75438
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.80519 2.90518 4.61117 1.7442 1.31994

CAGE analysis