Hb_000322_090

Information

Type -
Description -
Location Contig322: 103566-111971
Sequence    

Annotation

kegg
ID rcu:RCOM_1047540
description type 1 diacylglycerol acyltransferase (EC:2.3.1.20)
nr
ID NP_001292926.1
description diacylglycerol O-acyltransferase 1 [Jatropha curcas]
swissprot
ID Q9SLD2
description Diacylglycerol O-acyltransferase 1 OS=Arabidopsis thaliana GN=DGAT1 PE=1 SV=2
trembl
ID Q27ZJ3
description O-acyltransferase OS=Jatropha curcas GN=DGAT1 PE=2 SV=1
Gene Ontology
ID GO:0004144
description diacylglycerol o-acyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34040: 103603-104805 , PASA_asmbl_34042: 111223-111396
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000322_090 0.0 - - diacylglycerol O-acyltransferase 1 [Jatropha curcas]
2 Hb_003018_060 0.0995724973 - - PREDICTED: peptide methionine sulfoxide reductase A5 [Jatropha curcas]
3 Hb_004837_190 0.1062011624 - - PREDICTED: uncharacterized protein LOC105648286 [Jatropha curcas]
4 Hb_014361_100 0.1074519003 - - PREDICTED: casein kinase II subunit alpha [Cicer arietinum]
5 Hb_000123_090 0.1108934509 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein Os03g0620400-like [Jatropha curcas]
6 Hb_028390_010 0.1123220942 - - PREDICTED: filament-like plant protein 3 [Populus euphratica]
7 Hb_001584_290 0.1128381508 - - glucose-6-phosphate dehydrogenase [Hevea brasiliensis]
8 Hb_001983_030 0.1155330503 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 12 isoform X2 [Jatropha curcas]
9 Hb_031527_100 0.1157726673 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005656_210 0.1157750542 - - PREDICTED: uncharacterized protein LOC105637440 [Jatropha curcas]
11 Hb_014720_160 0.1159138061 - - PREDICTED: anthranilate phosphoribosyltransferase, chloroplastic [Jatropha curcas]
12 Hb_002477_130 0.116778214 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000002_490 0.1171410753 - - PREDICTED: uncharacterized protein LOC105632095 [Jatropha curcas]
14 Hb_011618_080 0.1181846048 - - PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Jatropha curcas]
15 Hb_000933_090 0.1183185412 - - PREDICTED: probable protein S-acyltransferase 22 [Jatropha curcas]
16 Hb_000645_050 0.1185569919 - - peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein [Populus trichocarpa]
17 Hb_000236_380 0.1196966931 - - PREDICTED: serine/threonine-protein kinase D6PK [Jatropha curcas]
18 Hb_002400_470 0.1200400472 - - PREDICTED: calcium uptake protein 1, mitochondrial isoform X1 [Jatropha curcas]
19 Hb_000923_040 0.1203164016 - - PREDICTED: 15 kDa selenoprotein [Jatropha curcas]
20 Hb_005867_060 0.122556324 - - PREDICTED: NADPH--cytochrome P450 reductase [Jatropha curcas]

Gene co-expression network

sample Hb_000322_090 Hb_000322_090 Hb_003018_060 Hb_003018_060 Hb_000322_090--Hb_003018_060 Hb_004837_190 Hb_004837_190 Hb_000322_090--Hb_004837_190 Hb_014361_100 Hb_014361_100 Hb_000322_090--Hb_014361_100 Hb_000123_090 Hb_000123_090 Hb_000322_090--Hb_000123_090 Hb_028390_010 Hb_028390_010 Hb_000322_090--Hb_028390_010 Hb_001584_290 Hb_001584_290 Hb_000322_090--Hb_001584_290 Hb_021422_010 Hb_021422_010 Hb_003018_060--Hb_021422_010 Hb_006960_050 Hb_006960_050 Hb_003018_060--Hb_006960_050 Hb_006623_020 Hb_006623_020 Hb_003018_060--Hb_006623_020 Hb_106552_050 Hb_106552_050 Hb_003018_060--Hb_106552_050 Hb_000640_220 Hb_000640_220 Hb_003018_060--Hb_000640_220 Hb_006620_020 Hb_006620_020 Hb_003018_060--Hb_006620_020 Hb_004837_190--Hb_006620_020 Hb_031527_100 Hb_031527_100 Hb_004837_190--Hb_031527_100 Hb_001341_120 Hb_001341_120 Hb_004837_190--Hb_001341_120 Hb_000913_050 Hb_000913_050 Hb_004837_190--Hb_000913_050 Hb_000538_100 Hb_000538_100 Hb_004837_190--Hb_000538_100 Hb_000618_030 Hb_000618_030 Hb_004837_190--Hb_000618_030 Hb_000329_390 Hb_000329_390 Hb_014361_100--Hb_000329_390 Hb_001348_050 Hb_001348_050 Hb_014361_100--Hb_001348_050 Hb_000236_380 Hb_000236_380 Hb_014361_100--Hb_000236_380 Hb_014361_100--Hb_001584_290 Hb_000042_270 Hb_000042_270 Hb_014361_100--Hb_000042_270 Hb_008864_110 Hb_008864_110 Hb_000123_090--Hb_008864_110 Hb_000933_020 Hb_000933_020 Hb_000123_090--Hb_000933_020 Hb_003605_130 Hb_003605_130 Hb_000123_090--Hb_003605_130 Hb_002400_470 Hb_002400_470 Hb_000123_090--Hb_002400_470 Hb_001195_560 Hb_001195_560 Hb_000123_090--Hb_001195_560 Hb_001047_030 Hb_001047_030 Hb_000123_090--Hb_001047_030 Hb_007044_080 Hb_007044_080 Hb_028390_010--Hb_007044_080 Hb_000982_160 Hb_000982_160 Hb_028390_010--Hb_000982_160 Hb_002527_030 Hb_002527_030 Hb_028390_010--Hb_002527_030 Hb_001689_020 Hb_001689_020 Hb_028390_010--Hb_001689_020 Hb_000933_090 Hb_000933_090 Hb_028390_010--Hb_000933_090 Hb_000645_050 Hb_000645_050 Hb_028390_010--Hb_000645_050 Hb_008143_030 Hb_008143_030 Hb_001584_290--Hb_008143_030 Hb_010222_080 Hb_010222_080 Hb_001584_290--Hb_010222_080 Hb_000104_080 Hb_000104_080 Hb_001584_290--Hb_000104_080 Hb_002587_020 Hb_002587_020 Hb_001584_290--Hb_002587_020 Hb_000923_040 Hb_000923_040 Hb_001584_290--Hb_000923_040 Hb_001584_290--Hb_000640_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
31.4827 10.206 13.778 18.429 41.447 19.1397
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.9045 11.3291 15.9217 7.31411 12.9467

CAGE analysis