Hb_000322_120

Information

Type -
Description -
Location Contig322: 133664-136112
Sequence    

Annotation

kegg
ID rcu:RCOM_1047210
description calmodulin binding protein, putative
nr
ID XP_012076958.1
description PREDICTED: uncharacterized protein LOC105637900 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KCB4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07427 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34049: 134106-135186
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000322_120 0.0 - - PREDICTED: uncharacterized protein LOC105637900 [Jatropha curcas]
2 Hb_005882_020 0.1102525593 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]
3 Hb_002660_090 0.1190603066 - - hypothetical protein JCGZ_16500 [Jatropha curcas]
4 Hb_002284_020 0.1275318821 - - PREDICTED: probable inorganic phosphate transporter 1-9 [Jatropha curcas]
5 Hb_000086_610 0.1383469292 - - PREDICTED: classical arabinogalactan protein 1-like [Populus euphratica]
6 Hb_001289_030 0.139967749 - - syntaxin, plant, putative [Ricinus communis]
7 Hb_002205_260 0.1416511368 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
8 Hb_000133_060 0.1424294873 - - PREDICTED: protein YLS9-like [Jatropha curcas]
9 Hb_001568_060 0.1438158991 - - PREDICTED: uncharacterized protein LOC105650728 [Jatropha curcas]
10 Hb_007433_020 0.1445774482 - - hypothetical protein VITISV_005320 [Vitis vinifera]
11 Hb_012545_080 0.1519850846 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
12 Hb_055706_010 0.15389877 - - hypothetical protein JCGZ_22222 [Jatropha curcas]
13 Hb_174380_010 0.1549485224 - - kinase, putative [Ricinus communis]
14 Hb_005357_270 0.1599350665 - - Glucose-6-phosphate/phosphate translocator 2, chloroplast precursor, putative [Ricinus communis]
15 Hb_000316_150 0.1608024127 - - Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis]
16 Hb_000297_100 0.1609596083 transcription factor TF Family: NAC NAC transcription factor 038 [Jatropha curcas]
17 Hb_009083_010 0.1609995828 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
18 Hb_019961_010 0.1614337641 - - hypothetical protein POPTR_0017s11350g [Populus trichocarpa]
19 Hb_002272_140 0.1627418219 - - PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Jatropha curcas]
20 Hb_009189_010 0.1646905275 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]

Gene co-expression network

sample Hb_000322_120 Hb_000322_120 Hb_005882_020 Hb_005882_020 Hb_000322_120--Hb_005882_020 Hb_002660_090 Hb_002660_090 Hb_000322_120--Hb_002660_090 Hb_002284_020 Hb_002284_020 Hb_000322_120--Hb_002284_020 Hb_000086_610 Hb_000086_610 Hb_000322_120--Hb_000086_610 Hb_001289_030 Hb_001289_030 Hb_000322_120--Hb_001289_030 Hb_002205_260 Hb_002205_260 Hb_000322_120--Hb_002205_260 Hb_055706_010 Hb_055706_010 Hb_005882_020--Hb_055706_010 Hb_089140_020 Hb_089140_020 Hb_005882_020--Hb_089140_020 Hb_000210_150 Hb_000210_150 Hb_005882_020--Hb_000210_150 Hb_005882_020--Hb_002660_090 Hb_000316_150 Hb_000316_150 Hb_005882_020--Hb_000316_150 Hb_002660_090--Hb_001289_030 Hb_035391_010 Hb_035391_010 Hb_002660_090--Hb_035391_010 Hb_025477_020 Hb_025477_020 Hb_002660_090--Hb_025477_020 Hb_002660_090--Hb_002205_260 Hb_117602_010 Hb_117602_010 Hb_002660_090--Hb_117602_010 Hb_002272_140 Hb_002272_140 Hb_002284_020--Hb_002272_140 Hb_000473_080 Hb_000473_080 Hb_002284_020--Hb_000473_080 Hb_174380_010 Hb_174380_010 Hb_002284_020--Hb_174380_010 Hb_000003_420 Hb_000003_420 Hb_002284_020--Hb_000003_420 Hb_021596_070 Hb_021596_070 Hb_002284_020--Hb_021596_070 Hb_001846_040 Hb_001846_040 Hb_000086_610--Hb_001846_040 Hb_006538_030 Hb_006538_030 Hb_000086_610--Hb_006538_030 Hb_019654_010 Hb_019654_010 Hb_000086_610--Hb_019654_010 Hb_011287_020 Hb_011287_020 Hb_000086_610--Hb_011287_020 Hb_009683_050 Hb_009683_050 Hb_000086_610--Hb_009683_050 Hb_009683_010 Hb_009683_010 Hb_001289_030--Hb_009683_010 Hb_001411_150 Hb_001411_150 Hb_001289_030--Hb_001411_150 Hb_003582_020 Hb_003582_020 Hb_001289_030--Hb_003582_020 Hb_009189_010 Hb_009189_010 Hb_001289_030--Hb_009189_010 Hb_001289_030--Hb_025477_020 Hb_007383_050 Hb_007383_050 Hb_001289_030--Hb_007383_050 Hb_007407_010 Hb_007407_010 Hb_002205_260--Hb_007407_010 Hb_000133_060 Hb_000133_060 Hb_002205_260--Hb_000133_060 Hb_012545_080 Hb_012545_080 Hb_002205_260--Hb_012545_080 Hb_002205_260--Hb_001289_030 Hb_002205_260--Hb_089140_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 10.8406 2.52542 1.13071 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.150336 0.315425 0.0372842 1.10693 0.124624

CAGE analysis