Hb_000326_020

Information

Type -
Description -
Location Contig326: 44681-49856
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000326_020 0.0 - - -
2 Hb_000721_020 0.1190657473 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
3 Hb_006045_060 0.1196671414 - - PREDICTED: uncharacterized protein LOC104222982, partial [Nicotiana sylvestris]
4 Hb_032533_010 0.2156117239 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
5 Hb_003687_180 0.2253584587 - - hypothetical protein JCGZ_02335 [Jatropha curcas]
6 Hb_074152_010 0.2679886609 - - -
7 Hb_001541_240 0.2724225893 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000917_250 0.2781390757 - - PREDICTED: coiled-coil domain-containing protein 130-like [Populus euphratica]
9 Hb_000866_160 0.3380414757 - - PREDICTED: elicitor-responsive protein 3 [Populus euphratica]
10 Hb_031089_060 0.3380822323 - - -
11 Hb_000457_040 0.3389768797 - - -
12 Hb_010232_010 0.3410538976 - - -
13 Hb_000487_390 0.3575300456 - - PREDICTED: putative pumilio homolog 21 [Jatropha curcas]
14 Hb_001263_020 0.3590390809 - - -
15 Hb_012656_010 0.3594222946 - - -
16 Hb_003812_010 0.3626190024 - - -
17 Hb_059924_010 0.3678674128 - - -
18 Hb_001773_020 0.3720348529 - - hypothetical protein POPTR_0016s00980g [Populus trichocarpa]
19 Hb_040991_010 0.3739089226 - - PREDICTED: choline monooxygenase, chloroplastic isoform X2 [Jatropha curcas]
20 Hb_001055_040 0.3821053596 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]

Gene co-expression network

sample Hb_000326_020 Hb_000326_020 Hb_000721_020 Hb_000721_020 Hb_000326_020--Hb_000721_020 Hb_006045_060 Hb_006045_060 Hb_000326_020--Hb_006045_060 Hb_032533_010 Hb_032533_010 Hb_000326_020--Hb_032533_010 Hb_003687_180 Hb_003687_180 Hb_000326_020--Hb_003687_180 Hb_074152_010 Hb_074152_010 Hb_000326_020--Hb_074152_010 Hb_001541_240 Hb_001541_240 Hb_000326_020--Hb_001541_240 Hb_000721_020--Hb_006045_060 Hb_000721_020--Hb_032533_010 Hb_000721_020--Hb_003687_180 Hb_000721_020--Hb_074152_010 Hb_000917_250 Hb_000917_250 Hb_000721_020--Hb_000917_250 Hb_006045_060--Hb_032533_010 Hb_006045_060--Hb_003687_180 Hb_006045_060--Hb_074152_010 Hb_006045_060--Hb_000917_250 Hb_032533_010--Hb_003687_180 Hb_001055_040 Hb_001055_040 Hb_032533_010--Hb_001055_040 Hb_010232_010 Hb_010232_010 Hb_032533_010--Hb_010232_010 Hb_003687_180--Hb_001055_040 Hb_003687_180--Hb_010232_010 Hb_074152_010--Hb_000917_250 Hb_000236_270 Hb_000236_270 Hb_074152_010--Hb_000236_270 Hb_001773_020 Hb_001773_020 Hb_074152_010--Hb_001773_020 Hb_001541_240--Hb_010232_010 Hb_001541_240--Hb_032533_010 Hb_001541_240--Hb_000721_020 Hb_001541_240--Hb_003687_180 Hb_001541_240--Hb_006045_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0869099 0 0 0 0.164001 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.161969 0 0 0

CAGE analysis