Hb_000327_060

Information

Type -
Description -
Location Contig327: 55170-60110
Sequence    

Annotation

kegg
ID eus:EUTSA_v10013692mg
description hypothetical protein
nr
ID XP_012073696.1
description PREDICTED: uncharacterized protein LOC105635258 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LMU6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06661 PE=4 SV=1
Gene Ontology
ID GO:0005739
description sporulation protein rmd1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34360: 55160-60168
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000327_060 0.0 - - PREDICTED: uncharacterized protein LOC105635258 isoform X2 [Jatropha curcas]
2 Hb_158445_010 0.0452370723 - - PREDICTED: cysteine protease ATG4-like isoform X1 [Jatropha curcas]
3 Hb_004143_150 0.0679755369 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 24-like isoform X6 [Jatropha curcas]
4 Hb_001545_160 0.0720301961 transcription factor TF Family: NAC PREDICTED: uncharacterized protein LOC102615208 isoform X1 [Citrus sinensis]
5 Hb_005162_060 0.0742983016 - - PREDICTED: putative septum site-determining protein minD homolog, chloroplastic [Jatropha curcas]
6 Hb_002676_090 0.0755124469 - - PREDICTED: protein TIC 22-like, chloroplastic [Jatropha curcas]
7 Hb_012423_030 0.077257439 - - PREDICTED: probable sodium/metabolite cotransporter BASS6, chloroplastic isoform X1 [Jatropha curcas]
8 Hb_000571_020 0.0801959172 - - PREDICTED: BAG family molecular chaperone regulator 4 isoform X1 [Jatropha curcas]
9 Hb_004324_270 0.0805881541 - - PREDICTED: mitochondrial carrier protein MTM1 [Jatropha curcas]
10 Hb_000107_160 0.0811890266 - - PREDICTED: uncharacterized protein LOC105645584 [Jatropha curcas]
11 Hb_000340_570 0.0837194629 - - PREDICTED: RNA-binding protein BRN1 [Jatropha curcas]
12 Hb_000424_200 0.0847718129 - - hypothetical protein JCGZ_07583 [Jatropha curcas]
13 Hb_004324_090 0.0849393369 - - PREDICTED: uncharacterized protein LOC105648352 isoform X1 [Jatropha curcas]
14 Hb_005446_010 0.0851720238 - - PREDICTED: zinc finger protein 830 [Jatropha curcas]
15 Hb_003349_090 0.0852458147 - - PREDICTED: diphthamide biosynthesis protein 2 [Jatropha curcas]
16 Hb_009803_050 0.0853077047 - - PREDICTED: uncharacterized protein LOC105644460 [Jatropha curcas]
17 Hb_013399_050 0.0875421101 - - PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1-like isoform X2 [Jatropha curcas]
18 Hb_000733_180 0.0883962164 - - PREDICTED: mitochondrial substrate carrier family protein B-like [Jatropha curcas]
19 Hb_000016_160 0.0885645077 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 48 [Jatropha curcas]
20 Hb_007037_020 0.0887874294 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 78 [Jatropha curcas]

Gene co-expression network

sample Hb_000327_060 Hb_000327_060 Hb_158445_010 Hb_158445_010 Hb_000327_060--Hb_158445_010 Hb_004143_150 Hb_004143_150 Hb_000327_060--Hb_004143_150 Hb_001545_160 Hb_001545_160 Hb_000327_060--Hb_001545_160 Hb_005162_060 Hb_005162_060 Hb_000327_060--Hb_005162_060 Hb_002676_090 Hb_002676_090 Hb_000327_060--Hb_002676_090 Hb_012423_030 Hb_012423_030 Hb_000327_060--Hb_012423_030 Hb_004324_090 Hb_004324_090 Hb_158445_010--Hb_004324_090 Hb_158445_010--Hb_005162_060 Hb_158445_010--Hb_004143_150 Hb_000310_020 Hb_000310_020 Hb_158445_010--Hb_000310_020 Hb_163256_020 Hb_163256_020 Hb_158445_010--Hb_163256_020 Hb_004899_370 Hb_004899_370 Hb_004143_150--Hb_004899_370 Hb_000001_060 Hb_000001_060 Hb_004143_150--Hb_000001_060 Hb_000920_110 Hb_000920_110 Hb_004143_150--Hb_000920_110 Hb_004127_020 Hb_004127_020 Hb_004143_150--Hb_004127_020 Hb_006615_240 Hb_006615_240 Hb_004143_150--Hb_006615_240 Hb_004102_110 Hb_004102_110 Hb_004143_150--Hb_004102_110 Hb_000340_570 Hb_000340_570 Hb_001545_160--Hb_000340_570 Hb_003502_060 Hb_003502_060 Hb_001545_160--Hb_003502_060 Hb_001545_160--Hb_158445_010 Hb_002304_160 Hb_002304_160 Hb_001545_160--Hb_002304_160 Hb_001545_160--Hb_012423_030 Hb_009803_050 Hb_009803_050 Hb_005162_060--Hb_009803_050 Hb_001514_120 Hb_001514_120 Hb_005162_060--Hb_001514_120 Hb_003038_240 Hb_003038_240 Hb_005162_060--Hb_003038_240 Hb_000424_200 Hb_000424_200 Hb_005162_060--Hb_000424_200 Hb_004567_120 Hb_004567_120 Hb_002676_090--Hb_004567_120 Hb_005568_120 Hb_005568_120 Hb_002676_090--Hb_005568_120 Hb_002676_090--Hb_004143_150 Hb_002676_090--Hb_004899_370 Hb_000107_160 Hb_000107_160 Hb_002676_090--Hb_000107_160 Hb_001545_170 Hb_001545_170 Hb_002676_090--Hb_001545_170 Hb_012423_030--Hb_000107_160 Hb_008453_030 Hb_008453_030 Hb_012423_030--Hb_008453_030 Hb_004324_270 Hb_004324_270 Hb_012423_030--Hb_004324_270 Hb_029879_130 Hb_029879_130 Hb_012423_030--Hb_029879_130 Hb_012675_050 Hb_012675_050 Hb_012423_030--Hb_012675_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.5277 12.7151 12.9208 13.0913 8.45303 10.1862
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.2418 38.371 25.6716 14.2053 17.2021

CAGE analysis