Hb_000327_160

Information

Type -
Description -
Location Contig327: 159049-163324
Sequence    

Annotation

kegg
ID rcu:RCOM_0744030
description receptor serine-threonine protein kinase, putative (EC:2.7.10.2)
nr
ID XP_002525053.1
description receptor serine-threonine protein kinase, putative [Ricinus communis]
swissprot
ID Q0WRY5
description Serine/threonine-protein kinase CDL1 OS=Arabidopsis thaliana GN=CDL1 PE=1 SV=1
trembl
ID B9SGD4
description Receptor serine-threonine protein kinase, putative OS=Ricinus communis GN=RCOM_0744030 PE=3 SV=1
Gene Ontology
ID GO:0004672
description serine threonine-protein kinase pbs1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000327_160 0.0 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
2 Hb_002748_020 0.1225939485 - - transducin family protein [Populus trichocarpa]
3 Hb_000950_010 0.132545925 - - PREDICTED: S-formylglutathione hydrolase [Jatropha curcas]
4 Hb_000203_260 0.1349365125 - - PREDICTED: microtubule-associated protein 70-2-like [Jatropha curcas]
5 Hb_000094_210 0.136930836 - - glucose-6-phosphate isomerase, putative [Ricinus communis]
6 Hb_000366_200 0.1428957403 - - PREDICTED: dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Jatropha curcas]
7 Hb_003994_150 0.1440282012 - - PREDICTED: pyrophosphate-energized membrane proton pump 2 [Jatropha curcas]
8 Hb_001008_180 0.1444540814 - - -
9 Hb_008159_010 0.1452559724 - - PREDICTED: 66 kDa stress protein [Jatropha curcas]
10 Hb_000019_200 0.146933474 - - PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X3 [Jatropha curcas]
11 Hb_006277_010 0.1511938813 - - PREDICTED: protein transport protein Sec61 subunit alpha-like [Gossypium raimondii]
12 Hb_002748_030 0.1542743297 - - nucleotide binding protein, putative [Ricinus communis]
13 Hb_008245_010 0.1550191636 - - PREDICTED: protein NEDD1 [Jatropha curcas]
14 Hb_003044_080 0.155693441 desease resistance Gene Name: Synthase_beta RecName: Full=ATP synthase subunit beta, mitochondrial; Flags: Precursor [Hevea brasiliensis]
15 Hb_003747_020 0.1564981179 - - PREDICTED: acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal isoform X1 [Jatropha curcas]
16 Hb_002631_010 0.1567159046 - - PREDICTED: V-type proton ATPase catalytic subunit A [Jatropha curcas]
17 Hb_000352_340 0.158028837 - - PREDICTED: importin-13 [Jatropha curcas]
18 Hb_001936_130 0.1595965533 - - PREDICTED: signal recognition particle receptor subunit beta-like [Jatropha curcas]
19 Hb_006162_010 0.1602720003 - - CAZy families GH95 protein, partial [uncultured Chitinophaga sp.]
20 Hb_007460_020 0.1614240314 - - PREDICTED: guanosine nucleotide diphosphate dissociation inhibitor 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000327_160 Hb_000327_160 Hb_002748_020 Hb_002748_020 Hb_000327_160--Hb_002748_020 Hb_000950_010 Hb_000950_010 Hb_000327_160--Hb_000950_010 Hb_000203_260 Hb_000203_260 Hb_000327_160--Hb_000203_260 Hb_000094_210 Hb_000094_210 Hb_000327_160--Hb_000094_210 Hb_000366_200 Hb_000366_200 Hb_000327_160--Hb_000366_200 Hb_003994_150 Hb_003994_150 Hb_000327_160--Hb_003994_150 Hb_001629_030 Hb_001629_030 Hb_002748_020--Hb_001629_030 Hb_000019_200 Hb_000019_200 Hb_002748_020--Hb_000019_200 Hb_005601_040 Hb_005601_040 Hb_002748_020--Hb_005601_040 Hb_000095_080 Hb_000095_080 Hb_002748_020--Hb_000095_080 Hb_000656_010 Hb_000656_010 Hb_002748_020--Hb_000656_010 Hb_006275_070 Hb_006275_070 Hb_002748_020--Hb_006275_070 Hb_006277_010 Hb_006277_010 Hb_000950_010--Hb_006277_010 Hb_002908_060 Hb_002908_060 Hb_000950_010--Hb_002908_060 Hb_003044_080 Hb_003044_080 Hb_000950_010--Hb_003044_080 Hb_000976_100 Hb_000976_100 Hb_000950_010--Hb_000976_100 Hb_004046_030 Hb_004046_030 Hb_000950_010--Hb_004046_030 Hb_003747_020 Hb_003747_020 Hb_000203_260--Hb_003747_020 Hb_000203_260--Hb_003994_150 Hb_005147_030 Hb_005147_030 Hb_000203_260--Hb_005147_030 Hb_002169_050 Hb_002169_050 Hb_000203_260--Hb_002169_050 Hb_000203_260--Hb_000366_200 Hb_000203_260--Hb_002748_020 Hb_000069_210 Hb_000069_210 Hb_000094_210--Hb_000069_210 Hb_002631_010 Hb_002631_010 Hb_000094_210--Hb_002631_010 Hb_007416_090 Hb_007416_090 Hb_000094_210--Hb_007416_090 Hb_001085_240 Hb_001085_240 Hb_000094_210--Hb_001085_240 Hb_003633_050 Hb_003633_050 Hb_000094_210--Hb_003633_050 Hb_000025_190 Hb_000025_190 Hb_000094_210--Hb_000025_190 Hb_002026_150 Hb_002026_150 Hb_000366_200--Hb_002026_150 Hb_000031_110 Hb_000031_110 Hb_000366_200--Hb_000031_110 Hb_000352_300 Hb_000352_300 Hb_000366_200--Hb_000352_300 Hb_000366_200--Hb_002169_050 Hb_010174_040 Hb_010174_040 Hb_000366_200--Hb_010174_040 Hb_002909_140 Hb_002909_140 Hb_000366_200--Hb_002909_140 Hb_003994_150--Hb_003747_020 Hb_002044_150 Hb_002044_150 Hb_003994_150--Hb_002044_150 Hb_000872_010 Hb_000872_010 Hb_003994_150--Hb_000872_010 Hb_003994_150--Hb_000069_210 Hb_001876_010 Hb_001876_010 Hb_003994_150--Hb_001876_010 Hb_000072_320 Hb_000072_320 Hb_003994_150--Hb_000072_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.24275 0.98604 2.33795 4.34799 1.74238 2.32365
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.03166 1.02755 6.45038 5.70095 3.20889

CAGE analysis