Hb_000327_210

Information

Type -
Description -
Location Contig327: 208771-210496
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000327_210 0.0 - - -
2 Hb_002942_070 0.0997897567 - - PREDICTED: centromere protein S isoform X1 [Jatropha curcas]
3 Hb_005015_010 0.1325548416 - - PREDICTED: programmed cell death protein 2-like [Jatropha curcas]
4 Hb_000768_030 0.1337234255 - - PREDICTED: ELMO domain-containing protein A isoform X1 [Jatropha curcas]
5 Hb_000172_120 0.1362686776 - - PREDICTED: uncharacterized protein LOC105650770 isoform X1 [Jatropha curcas]
6 Hb_004813_010 0.1386121383 - - nucleic acid binding protein, putative [Ricinus communis]
7 Hb_000062_230 0.1386451539 - - PREDICTED: probable thimet oligopeptidase isoform X1 [Jatropha curcas]
8 Hb_011609_190 0.1401525616 - - 14-3-3 protein 2 [Hevea brasiliensis]
9 Hb_004970_200 0.1408820336 - - serine/threonine-protein kinase, putative [Ricinus communis]
10 Hb_000771_110 0.1417137214 - - protein phosphatase 2C [Hevea brasiliensis]
11 Hb_000175_490 0.1417331797 - - PREDICTED: probable polygalacturonase At1g80170 isoform X1 [Jatropha curcas]
12 Hb_001198_090 0.1432275213 - - PREDICTED: uncharacterized protein LOC105633343 [Jatropha curcas]
13 Hb_000300_540 0.1480026892 - - PREDICTED: syntaxin-132 [Jatropha curcas]
14 Hb_033080_010 0.1489123184 - - -
15 Hb_000733_060 0.1499384041 - - PREDICTED: protein GUCD1 isoform X1 [Jatropha curcas]
16 Hb_002044_090 0.1501991065 - - PREDICTED: uncharacterized protein LOC105643541 isoform X1 [Jatropha curcas]
17 Hb_005333_040 0.1517938626 - - PREDICTED: dnaJ homolog subfamily C member 5 [Prunus mume]
18 Hb_004096_170 0.1522943283 - - PREDICTED: uncharacterized protein DDB_G0275933 [Jatropha curcas]
19 Hb_002377_040 0.1529268179 - - serine/threonine protein kinase, putative [Ricinus communis]
20 Hb_002276_190 0.1531851876 - - PREDICTED: uncharacterized protein LOC105640686 [Jatropha curcas]

Gene co-expression network

sample Hb_000327_210 Hb_000327_210 Hb_002942_070 Hb_002942_070 Hb_000327_210--Hb_002942_070 Hb_005015_010 Hb_005015_010 Hb_000327_210--Hb_005015_010 Hb_000768_030 Hb_000768_030 Hb_000327_210--Hb_000768_030 Hb_000172_120 Hb_000172_120 Hb_000327_210--Hb_000172_120 Hb_004813_010 Hb_004813_010 Hb_000327_210--Hb_004813_010 Hb_000062_230 Hb_000062_230 Hb_000327_210--Hb_000062_230 Hb_003633_130 Hb_003633_130 Hb_002942_070--Hb_003633_130 Hb_002942_070--Hb_000172_120 Hb_004502_030 Hb_004502_030 Hb_002942_070--Hb_004502_030 Hb_002942_070--Hb_004813_010 Hb_002942_070--Hb_000062_230 Hb_000188_190 Hb_000188_190 Hb_005015_010--Hb_000188_190 Hb_004096_170 Hb_004096_170 Hb_005015_010--Hb_004096_170 Hb_000183_070 Hb_000183_070 Hb_005015_010--Hb_000183_070 Hb_005714_040 Hb_005714_040 Hb_005015_010--Hb_005714_040 Hb_009801_010 Hb_009801_010 Hb_005015_010--Hb_009801_010 Hb_004374_010 Hb_004374_010 Hb_005015_010--Hb_004374_010 Hb_000175_490 Hb_000175_490 Hb_000768_030--Hb_000175_490 Hb_000733_060 Hb_000733_060 Hb_000768_030--Hb_000733_060 Hb_023226_060 Hb_023226_060 Hb_000768_030--Hb_023226_060 Hb_003453_020 Hb_003453_020 Hb_000768_030--Hb_003453_020 Hb_004032_050 Hb_004032_050 Hb_000768_030--Hb_004032_050 Hb_003384_030 Hb_003384_030 Hb_000768_030--Hb_003384_030 Hb_007441_340 Hb_007441_340 Hb_000172_120--Hb_007441_340 Hb_000172_120--Hb_004096_170 Hb_000172_120--Hb_003453_020 Hb_001269_150 Hb_001269_150 Hb_000172_120--Hb_001269_150 Hb_002400_220 Hb_002400_220 Hb_000172_120--Hb_002400_220 Hb_002377_040 Hb_002377_040 Hb_000172_120--Hb_002377_040 Hb_001493_100 Hb_001493_100 Hb_004813_010--Hb_001493_100 Hb_001514_020 Hb_001514_020 Hb_004813_010--Hb_001514_020 Hb_004813_010--Hb_004096_170 Hb_002044_090 Hb_002044_090 Hb_004813_010--Hb_002044_090 Hb_000847_070 Hb_000847_070 Hb_004813_010--Hb_000847_070 Hb_004813_010--Hb_000062_230 Hb_000062_230--Hb_002044_090 Hb_000062_230--Hb_002377_040 Hb_005754_020 Hb_005754_020 Hb_000062_230--Hb_005754_020 Hb_000062_230--Hb_004374_010 Hb_003352_050 Hb_003352_050 Hb_000062_230--Hb_003352_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.529625 0.0726458 0.121961 0.0723237 0.784095 0.355013
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.360932 0.283704 0.250752 0.0289633 0

CAGE analysis