Hb_000327_250

Information

Type -
Description -
Location Contig327: 252514-267067
Sequence    

Annotation

kegg
ID rcu:RCOM_0744890
description erythroblast macrophage protein emp, putative
nr
ID XP_012073466.1
description PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
swissprot
ID Q7SXR3
description Macrophage erythroblast attacher OS=Danio rerio GN=maea PE=2 SV=2
trembl
ID A0A067LFT0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06639 PE=4 SV=1
Gene Ontology
ID GO:0005515
description macrophage erythroblast attacher

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34389: 252725-266714 , PASA_asmbl_34390: 252591-266732
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000327_250 0.0 - - PREDICTED: macrophage erythroblast attacher [Jatropha curcas]
2 Hb_003544_030 0.0410077085 - - PREDICTED: citrate synthase, glyoxysomal [Jatropha curcas]
3 Hb_016347_010 0.0604737353 - - protein transporter, putative [Ricinus communis]
4 Hb_005663_110 0.0619879082 - - PREDICTED: large proline-rich protein BAG6 isoform X2 [Jatropha curcas]
5 Hb_004096_110 0.0660376411 - - PREDICTED: T-complex protein 1 subunit gamma-like [Jatropha curcas]
6 Hb_021576_010 0.0690037984 - - PREDICTED: probable protein phosphatase 2C 60 [Jatropha curcas]
7 Hb_001434_080 0.0721840831 - - PREDICTED: probable protein S-acyltransferase 7 [Jatropha curcas]
8 Hb_003776_060 0.0745144948 - - PREDICTED: uncharacterized protein LOC105641220 [Jatropha curcas]
9 Hb_001828_180 0.0765728859 - - 26S proteasome regulatory subunit S3, putative [Ricinus communis]
10 Hb_003777_290 0.0792956098 - - polypyrimidine tract binding protein, putative [Ricinus communis]
11 Hb_000836_460 0.0796099486 - - PREDICTED: uncharacterized protein LOC105628435 [Jatropha curcas]
12 Hb_003020_100 0.0803271708 - - PREDICTED: transcription initiation factor IIA large subunit [Jatropha curcas]
13 Hb_012022_080 0.0831739688 - - ubiquitin-protein ligase, putative [Ricinus communis]
14 Hb_001221_020 0.0843393712 - - PREDICTED: probable aspartyl aminopeptidase [Jatropha curcas]
15 Hb_001642_070 0.0845985353 - - PREDICTED: uncharacterized protein LOC105646431 [Jatropha curcas]
16 Hb_000979_220 0.085348029 - - PREDICTED: uncharacterized protein LOC105634085 isoform X1 [Jatropha curcas]
17 Hb_004677_050 0.0862385861 - - PREDICTED: importin beta-like SAD2 isoform X2 [Jatropha curcas]
18 Hb_011883_020 0.0865380885 - - PREDICTED: LOW QUALITY PROTEIN: aspartate--tRNA ligase, cytoplasmic-like [Jatropha curcas]
19 Hb_002232_360 0.0883669307 - - PREDICTED: proline iminopeptidase isoform X2 [Jatropha curcas]
20 Hb_000460_080 0.0888598601 - - acyl-coenzyme A binding domain containing, putative [Ricinus communis]

Gene co-expression network

sample Hb_000327_250 Hb_000327_250 Hb_003544_030 Hb_003544_030 Hb_000327_250--Hb_003544_030 Hb_016347_010 Hb_016347_010 Hb_000327_250--Hb_016347_010 Hb_005663_110 Hb_005663_110 Hb_000327_250--Hb_005663_110 Hb_004096_110 Hb_004096_110 Hb_000327_250--Hb_004096_110 Hb_021576_010 Hb_021576_010 Hb_000327_250--Hb_021576_010 Hb_001434_080 Hb_001434_080 Hb_000327_250--Hb_001434_080 Hb_003544_030--Hb_005663_110 Hb_003544_030--Hb_001434_080 Hb_003544_030--Hb_016347_010 Hb_006452_120 Hb_006452_120 Hb_003544_030--Hb_006452_120 Hb_017387_010 Hb_017387_010 Hb_003544_030--Hb_017387_010 Hb_000363_040 Hb_000363_040 Hb_016347_010--Hb_000363_040 Hb_004677_050 Hb_004677_050 Hb_016347_010--Hb_004677_050 Hb_002908_050 Hb_002908_050 Hb_016347_010--Hb_002908_050 Hb_016347_010--Hb_021576_010 Hb_005663_110--Hb_001434_080 Hb_005663_110--Hb_004677_050 Hb_000984_170 Hb_000984_170 Hb_005663_110--Hb_000984_170 Hb_039946_050 Hb_039946_050 Hb_005663_110--Hb_039946_050 Hb_004096_110--Hb_021576_010 Hb_003777_290 Hb_003777_290 Hb_004096_110--Hb_003777_290 Hb_000979_220 Hb_000979_220 Hb_004096_110--Hb_000979_220 Hb_011883_020 Hb_011883_020 Hb_004096_110--Hb_011883_020 Hb_001269_600 Hb_001269_600 Hb_004096_110--Hb_001269_600 Hb_021576_010--Hb_000979_220 Hb_021576_010--Hb_003777_290 Hb_001828_180 Hb_001828_180 Hb_021576_010--Hb_001828_180 Hb_001500_140 Hb_001500_140 Hb_001434_080--Hb_001500_140 Hb_011016_050 Hb_011016_050 Hb_001434_080--Hb_011016_050 Hb_002989_020 Hb_002989_020 Hb_001434_080--Hb_002989_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
6.73878 13.2046 11.2111 19.0777 9.48409 8.64154
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.60279 10.0626 10.8964 25.519 11.6747

CAGE analysis