Hb_000329_260

Information

Type -
Description -
Location Contig329: 158991-159308
Sequence    

Annotation

kegg
ID egr:104442266
description 14 kDa proline-rich protein DC2.15
nr
ID EYU18564.1
description hypothetical protein MIMGU_mgv1a016162mg [Erythranthe guttata]
swissprot
ID P14009
description 14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1
trembl
ID A0A022PSS9
description Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016162mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34515: 159852-160920
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000329_260 0.0 - - hypothetical protein MIMGU_mgv1a016162mg [Erythranthe guttata]
2 Hb_033870_010 0.2076721161 - - PREDICTED: uncharacterized protein LOC104101109 isoform X1 [Nicotiana tomentosiformis]
3 Hb_001979_030 0.2767474873 - - hypothetical protein POPTR_0016s06130g [Populus trichocarpa]
4 Hb_001417_080 0.2820947859 - - Calmodulin, putative [Ricinus communis]
5 Hb_001864_090 0.2868269509 - - -
6 Hb_000136_160 0.2935839344 - - calmodulin binding protein, putative [Ricinus communis]
7 Hb_000032_050 0.3023121414 - - hypothetical protein RCOM_1691130 [Ricinus communis]
8 Hb_001922_180 0.3101532448 - - hevamine-A precursor, putative [Ricinus communis]
9 Hb_007889_020 0.3199250803 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003996_030 0.3227335039 - - -
11 Hb_000603_010 0.3235306607 - - PREDICTED: transmembrane protein 87A-like [Nelumbo nucifera]
12 Hb_006376_010 0.326230787 - - PREDICTED: uncharacterized protein LOC104090718 [Nicotiana tomentosiformis]
13 Hb_027450_020 0.3349952118 - - PREDICTED: B3 domain-containing protein At2g31420-like [Citrus sinensis]
14 Hb_009486_110 0.3351002533 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
15 Hb_000946_160 0.3377619274 transcription factor TF Family: GNAT PREDICTED: uncharacterized N-acetyltransferase ycf52 [Jatropha curcas]
16 Hb_002081_170 0.3410435188 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
17 Hb_056559_010 0.3410509501 - - PREDICTED: uncharacterized protein LOC104088595 [Nicotiana tomentosiformis]
18 Hb_001563_020 0.3423452325 transcription factor TF Family: TRAF aberrant large forked product, putative [Ricinus communis]
19 Hb_006120_090 0.3526000118 - - PREDICTED: desiccation-related protein PCC13-62-like [Jatropha curcas]
20 Hb_006775_050 0.3526473015 - - PREDICTED: GDSL esterase/lipase At1g29670 isoform X2 [Nicotiana sylvestris]

Gene co-expression network

sample Hb_000329_260 Hb_000329_260 Hb_033870_010 Hb_033870_010 Hb_000329_260--Hb_033870_010 Hb_001979_030 Hb_001979_030 Hb_000329_260--Hb_001979_030 Hb_001417_080 Hb_001417_080 Hb_000329_260--Hb_001417_080 Hb_001864_090 Hb_001864_090 Hb_000329_260--Hb_001864_090 Hb_000136_160 Hb_000136_160 Hb_000329_260--Hb_000136_160 Hb_000032_050 Hb_000032_050 Hb_000329_260--Hb_000032_050 Hb_000895_080 Hb_000895_080 Hb_033870_010--Hb_000895_080 Hb_033870_010--Hb_000032_050 Hb_033870_010--Hb_001864_090 Hb_033870_010--Hb_001417_080 Hb_033546_020 Hb_033546_020 Hb_033870_010--Hb_033546_020 Hb_006120_090 Hb_006120_090 Hb_001979_030--Hb_006120_090 Hb_000205_200 Hb_000205_200 Hb_001979_030--Hb_000205_200 Hb_044555_010 Hb_044555_010 Hb_001979_030--Hb_044555_010 Hb_003996_030 Hb_003996_030 Hb_001979_030--Hb_003996_030 Hb_001979_030--Hb_001864_090 Hb_024399_030 Hb_024399_030 Hb_001417_080--Hb_024399_030 Hb_010812_090 Hb_010812_090 Hb_001417_080--Hb_010812_090 Hb_002259_050 Hb_002259_050 Hb_001417_080--Hb_002259_050 Hb_002299_020 Hb_002299_020 Hb_001417_080--Hb_002299_020 Hb_000946_160 Hb_000946_160 Hb_001864_090--Hb_000946_160 Hb_001922_180 Hb_001922_180 Hb_001864_090--Hb_001922_180 Hb_005489_010 Hb_005489_010 Hb_001864_090--Hb_005489_010 Hb_003206_100 Hb_003206_100 Hb_001864_090--Hb_003206_100 Hb_002025_210 Hb_002025_210 Hb_001864_090--Hb_002025_210 Hb_021888_040 Hb_021888_040 Hb_001864_090--Hb_021888_040 Hb_006376_010 Hb_006376_010 Hb_000136_160--Hb_006376_010 Hb_004097_040 Hb_004097_040 Hb_000136_160--Hb_004097_040 Hb_000136_160--Hb_000205_200 Hb_000136_160--Hb_044555_010 Hb_002094_040 Hb_002094_040 Hb_000136_160--Hb_002094_040 Hb_004200_030 Hb_004200_030 Hb_000136_160--Hb_004200_030 Hb_000032_050--Hb_001922_180 Hb_000445_170 Hb_000445_170 Hb_000032_050--Hb_000445_170 Hb_113739_010 Hb_113739_010 Hb_000032_050--Hb_113739_010 Hb_000109_230 Hb_000109_230 Hb_000032_050--Hb_000109_230 Hb_033354_020 Hb_033354_020 Hb_000032_050--Hb_033354_020 Hb_001828_100 Hb_001828_100 Hb_000032_050--Hb_001828_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.136136 0 0 0.855742 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.64923 0.255403 0 0 0

CAGE analysis