Hb_000329_690

Information

Type -
Description -
Location Contig329: 519585-525211
Sequence    

Annotation

kegg
ID rcu:RCOM_1609300
description hypothetical protein
nr
ID XP_012083686.1
description PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KAK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14615 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000329_690 0.0 - - PREDICTED: uncharacterized protein LOC105643212 isoform X2 [Jatropha curcas]
2 Hb_168918_020 0.0813449645 - - pectin acetylesterase, putative [Ricinus communis]
3 Hb_000107_390 0.0903447165 - - PREDICTED: uncharacterized protein LOC100245962 [Vitis vinifera]
4 Hb_004884_220 0.0906238595 - - hypothetical protein 29 [Hevea brasiliensis]
5 Hb_000345_560 0.0945761899 - - -
6 Hb_033080_010 0.0947908365 - - -
7 Hb_001754_150 0.0981076233 - - PREDICTED: vesicle-associated membrane protein 724 [Jatropha curcas]
8 Hb_002477_240 0.0985349901 - - hypothetical protein POPTR_0001s20590g [Populus trichocarpa]
9 Hb_002997_170 0.1013338312 - - PREDICTED: uncharacterized protein LOC105131887 [Populus euphratica]
10 Hb_005333_040 0.1037435859 - - PREDICTED: dnaJ homolog subfamily C member 5 [Prunus mume]
11 Hb_000260_050 0.1041826869 - - PREDICTED: serine/threonine-protein kinase AtPK2/AtPK19-like [Jatropha curcas]
12 Hb_000417_180 0.1053831757 - - 60S ribosomal protein L11, putative [Ricinus communis]
13 Hb_001804_040 0.1077556007 - - conserved hypothetical protein [Ricinus communis]
14 Hb_005843_110 0.1081129361 - - Caltractin, putative [Ricinus communis]
15 Hb_012675_090 0.1091520838 - - PREDICTED: DNA-directed RNA polymerase II subunit 4-like isoform X1 [Citrus sinensis]
16 Hb_012340_030 0.1105303914 - - PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Jatropha curcas]
17 Hb_007152_020 0.1111082308 - - PREDICTED: zinc finger CCCH domain-containing protein 62 isoform X2 [Jatropha curcas]
18 Hb_000538_020 0.1125106764 - - PREDICTED: autophagy protein 5 [Jatropha curcas]
19 Hb_030620_010 0.112717201 - - -
20 Hb_003752_110 0.1148380316 - - -

Gene co-expression network

sample Hb_000329_690 Hb_000329_690 Hb_168918_020 Hb_168918_020 Hb_000329_690--Hb_168918_020 Hb_000107_390 Hb_000107_390 Hb_000329_690--Hb_000107_390 Hb_004884_220 Hb_004884_220 Hb_000329_690--Hb_004884_220 Hb_000345_560 Hb_000345_560 Hb_000329_690--Hb_000345_560 Hb_033080_010 Hb_033080_010 Hb_000329_690--Hb_033080_010 Hb_001754_150 Hb_001754_150 Hb_000329_690--Hb_001754_150 Hb_012340_030 Hb_012340_030 Hb_168918_020--Hb_012340_030 Hb_168918_020--Hb_000107_390 Hb_000017_120 Hb_000017_120 Hb_168918_020--Hb_000017_120 Hb_002997_170 Hb_002997_170 Hb_168918_020--Hb_002997_170 Hb_001776_110 Hb_001776_110 Hb_168918_020--Hb_001776_110 Hb_118419_020 Hb_118419_020 Hb_168918_020--Hb_118419_020 Hb_000538_020 Hb_000538_020 Hb_000107_390--Hb_000538_020 Hb_000107_390--Hb_012340_030 Hb_000107_390--Hb_000017_120 Hb_000771_110 Hb_000771_110 Hb_000107_390--Hb_000771_110 Hb_000001_020 Hb_000001_020 Hb_000107_390--Hb_000001_020 Hb_004738_080 Hb_004738_080 Hb_004884_220--Hb_004738_080 Hb_002477_240 Hb_002477_240 Hb_004884_220--Hb_002477_240 Hb_005535_050 Hb_005535_050 Hb_004884_220--Hb_005535_050 Hb_000977_080 Hb_000977_080 Hb_004884_220--Hb_000977_080 Hb_000417_180 Hb_000417_180 Hb_004884_220--Hb_000417_180 Hb_007992_030 Hb_007992_030 Hb_000345_560--Hb_007992_030 Hb_004502_030 Hb_004502_030 Hb_000345_560--Hb_004502_030 Hb_000847_070 Hb_000847_070 Hb_000345_560--Hb_000847_070 Hb_000345_560--Hb_002997_170 Hb_003055_050 Hb_003055_050 Hb_000345_560--Hb_003055_050 Hb_000345_560--Hb_168918_020 Hb_005333_040 Hb_005333_040 Hb_033080_010--Hb_005333_040 Hb_006501_150 Hb_006501_150 Hb_033080_010--Hb_006501_150 Hb_033080_010--Hb_000345_560 Hb_006261_040 Hb_006261_040 Hb_033080_010--Hb_006261_040 Hb_033080_010--Hb_007992_030 Hb_001754_150--Hb_002477_240 Hb_001019_090 Hb_001019_090 Hb_001754_150--Hb_001019_090 Hb_001804_040 Hb_001804_040 Hb_001754_150--Hb_001804_040 Hb_000260_050 Hb_000260_050 Hb_001754_150--Hb_000260_050 Hb_042202_010 Hb_042202_010 Hb_001754_150--Hb_042202_010 Hb_000392_270 Hb_000392_270 Hb_001754_150--Hb_000392_270
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.4981 1.34952 3.35295 1.83943 15.848 11.3164
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.60154 16.3803 9.47829 2.30602 2.36555

CAGE analysis