Hb_000330_030

Information

Type -
Description -
Location Contig330: 34238-34636
Sequence    

Annotation

kegg
ID rcu:RCOM_1594890
description hypothetical protein
nr
ID XP_012071889.1
description PREDICTED: uncharacterized protein LOC105633814 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L205
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04450 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000330_030 0.0 - - PREDICTED: uncharacterized protein LOC105633814 [Jatropha curcas]
2 Hb_003673_040 0.1960654457 - - dynamin family protein [Populus trichocarpa]
3 Hb_001496_130 0.2029109256 - - -
4 Hb_012506_070 0.2432907789 - - hypothetical protein POPTR_0004s20060g [Populus trichocarpa]
5 Hb_000856_060 0.257715472 - - -
6 Hb_000690_150 0.2582748374 - - PREDICTED: uncharacterized protein LOC105628582 [Jatropha curcas]
7 Hb_050959_010 0.2585901512 - - -
8 Hb_002175_020 0.2652455925 - - PREDICTED: uncharacterized protein LOC105642125 isoform X2 [Jatropha curcas]
9 Hb_000062_660 0.2677179632 - - hypothetical protein POPTR_0009s03470g [Populus trichocarpa]
10 Hb_002837_050 0.2695542595 - - hypothetical protein POPTR_0006s00550g [Populus trichocarpa]
11 Hb_000438_140 0.2712984191 - - hypothetical protein CISIN_1g018088mg [Citrus sinensis]
12 Hb_000733_190 0.2714457287 - - zinc ion binding protein, putative [Ricinus communis]
13 Hb_000889_010 0.2728751806 transcription factor TF Family: MYB-related hypothetical protein PRUPE_ppa014728mg [Prunus persica]
14 Hb_001825_040 0.2731608836 - - myosin XI, putative [Ricinus communis]
15 Hb_040734_010 0.2736061176 - - PREDICTED: pentatricopeptide repeat-containing protein At2g37230 [Jatropha curcas]
16 Hb_005656_170 0.2756042943 - - PREDICTED: uncharacterized protein LOC105637447 isoform X1 [Jatropha curcas]
17 Hb_058620_060 0.2762675001 - - uncharacterized protein LOC105646159 precursor [Jatropha curcas]
18 Hb_000186_270 0.2767476419 - - hypothetical protein JCGZ_02112 [Jatropha curcas]
19 Hb_153269_010 0.277318549 - - hypothetical protein CICLE_v10029937mg [Citrus clementina]
20 Hb_018272_060 0.2779250117 - - PREDICTED: mavicyanin-like [Citrus sinensis]

Gene co-expression network

sample Hb_000330_030 Hb_000330_030 Hb_003673_040 Hb_003673_040 Hb_000330_030--Hb_003673_040 Hb_001496_130 Hb_001496_130 Hb_000330_030--Hb_001496_130 Hb_012506_070 Hb_012506_070 Hb_000330_030--Hb_012506_070 Hb_000856_060 Hb_000856_060 Hb_000330_030--Hb_000856_060 Hb_000690_150 Hb_000690_150 Hb_000330_030--Hb_000690_150 Hb_050959_010 Hb_050959_010 Hb_000330_030--Hb_050959_010 Hb_021079_010 Hb_021079_010 Hb_003673_040--Hb_021079_010 Hb_027298_030 Hb_027298_030 Hb_003673_040--Hb_027298_030 Hb_097218_020 Hb_097218_020 Hb_003673_040--Hb_097218_020 Hb_003181_060 Hb_003181_060 Hb_003673_040--Hb_003181_060 Hb_002631_300 Hb_002631_300 Hb_003673_040--Hb_002631_300 Hb_001496_130--Hb_000856_060 Hb_000370_070 Hb_000370_070 Hb_001496_130--Hb_000370_070 Hb_017434_070 Hb_017434_070 Hb_001496_130--Hb_017434_070 Hb_012940_030 Hb_012940_030 Hb_001496_130--Hb_012940_030 Hb_001148_060 Hb_001148_060 Hb_001496_130--Hb_001148_060 Hb_000438_140 Hb_000438_140 Hb_012506_070--Hb_000438_140 Hb_000200_010 Hb_000200_010 Hb_012506_070--Hb_000200_010 Hb_001109_050 Hb_001109_050 Hb_012506_070--Hb_001109_050 Hb_113853_010 Hb_113853_010 Hb_012506_070--Hb_113853_010 Hb_134849_010 Hb_134849_010 Hb_012506_070--Hb_134849_010 Hb_001277_030 Hb_001277_030 Hb_012506_070--Hb_001277_030 Hb_000245_080 Hb_000245_080 Hb_000856_060--Hb_000245_080 Hb_009557_030 Hb_009557_030 Hb_000856_060--Hb_009557_030 Hb_000445_470 Hb_000445_470 Hb_000856_060--Hb_000445_470 Hb_001255_010 Hb_001255_010 Hb_000856_060--Hb_001255_010 Hb_004480_020 Hb_004480_020 Hb_000856_060--Hb_004480_020 Hb_007423_050 Hb_007423_050 Hb_000690_150--Hb_007423_050 Hb_000796_240 Hb_000796_240 Hb_000690_150--Hb_000796_240 Hb_000008_420 Hb_000008_420 Hb_000690_150--Hb_000008_420 Hb_011671_270 Hb_011671_270 Hb_000690_150--Hb_011671_270 Hb_028960_030 Hb_028960_030 Hb_000690_150--Hb_028960_030 Hb_005215_020 Hb_005215_020 Hb_000690_150--Hb_005215_020 Hb_006384_010 Hb_006384_010 Hb_050959_010--Hb_006384_010 Hb_001140_070 Hb_001140_070 Hb_050959_010--Hb_001140_070 Hb_001825_040 Hb_001825_040 Hb_050959_010--Hb_001825_040 Hb_116420_010 Hb_116420_010 Hb_050959_010--Hb_116420_010 Hb_002259_060 Hb_002259_060 Hb_050959_010--Hb_002259_060 Hb_000889_010 Hb_000889_010 Hb_050959_010--Hb_000889_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.01372 0.758333 1.49092 2.40132 0.162681 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.21419 1.91433 0 1.48503 1.93495

CAGE analysis