Hb_000330_160

Information

Type -
Description -
Location Contig330: 138804-143373
Sequence    

Annotation

kegg
ID rcu:RCOM_1595080
description hydrolase, hydrolyzing O-glycosyl compounds, putative
nr
ID KDP38537.1
description hypothetical protein JCGZ_04462 [Jatropha curcas]
swissprot
ID Q9FJZ3
description Mannan endo-1,4-beta-mannosidase 7 OS=Arabidopsis thaliana GN=MAN7 PE=2 SV=1
trembl
ID A0A067KQX1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04462 PE=3 SV=1
Gene Ontology
ID GO:0004553
description mannan endo- -beta-mannosidase 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34707: 139969-140762
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000330_160 0.0 - - hypothetical protein JCGZ_04462 [Jatropha curcas]
2 Hb_005144_030 0.1117127742 - - PREDICTED: alpha-L-fucosidase 1 [Jatropha curcas]
3 Hb_002742_070 0.127456336 - - PREDICTED: villin-4-like [Jatropha curcas]
4 Hb_011953_030 0.1379976345 transcription factor TF Family: C2C2-Dof hypothetical protein POPTR_0003s14450g [Populus trichocarpa]
5 Hb_003814_030 0.1463010338 - - PREDICTED: WAT1-related protein At5g47470-like isoform X2 [Jatropha curcas]
6 Hb_001031_040 0.148448331 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000136_190 0.1556351139 - - PREDICTED: protein-S-isoprenylcysteine O-methyltransferase A-like isoform X1 [Jatropha curcas]
8 Hb_002815_060 0.1582532745 - - hypothetical protein B456_002G110500 [Gossypium raimondii]
9 Hb_000206_120 0.1588427315 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Jatropha curcas]
10 Hb_031069_020 0.1593466002 - - PREDICTED: protein STRICTOSIDINE SYNTHASE-LIKE 3-like [Jatropha curcas]
11 Hb_006508_030 0.1639025007 - - PREDICTED: CDPK-related kinase 1-like [Jatropha curcas]
12 Hb_009119_030 0.1658888641 - - GMFP4 [Medicago truncatula]
13 Hb_001369_350 0.1669757832 - - Cisplatin resistance-associated overexpressed protein, putative [Ricinus communis]
14 Hb_002742_080 0.1675667008 - - unknown [Populus trichocarpa]
15 Hb_001731_020 0.1687211462 - - PREDICTED: T-complex protein 1 subunit gamma-like [Jatropha curcas]
16 Hb_003157_030 0.1725784129 - - PREDICTED: exocyst complex component EXO70A1-like [Nicotiana sylvestris]
17 Hb_003492_010 0.1731084863 - - DREPP plasma membrane polypeptide family protein [Populus trichocarpa]
18 Hb_001901_080 0.1732077964 - - PREDICTED: xylose isomerase [Jatropha curcas]
19 Hb_007044_230 0.1738937392 - - PREDICTED: uncharacterized protein LOC105638702 [Jatropha curcas]
20 Hb_003029_130 0.1741252886 - - carboxypeptidase regulatory region-containingprotein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000330_160 Hb_000330_160 Hb_005144_030 Hb_005144_030 Hb_000330_160--Hb_005144_030 Hb_002742_070 Hb_002742_070 Hb_000330_160--Hb_002742_070 Hb_011953_030 Hb_011953_030 Hb_000330_160--Hb_011953_030 Hb_003814_030 Hb_003814_030 Hb_000330_160--Hb_003814_030 Hb_001031_040 Hb_001031_040 Hb_000330_160--Hb_001031_040 Hb_000136_190 Hb_000136_190 Hb_000330_160--Hb_000136_190 Hb_002815_060 Hb_002815_060 Hb_005144_030--Hb_002815_060 Hb_005260_040 Hb_005260_040 Hb_005144_030--Hb_005260_040 Hb_006501_020 Hb_006501_020 Hb_005144_030--Hb_006501_020 Hb_005144_030--Hb_002742_070 Hb_001369_350 Hb_001369_350 Hb_005144_030--Hb_001369_350 Hb_002742_070--Hb_002815_060 Hb_178041_010 Hb_178041_010 Hb_002742_070--Hb_178041_010 Hb_003157_030 Hb_003157_030 Hb_002742_070--Hb_003157_030 Hb_010128_120 Hb_010128_120 Hb_002742_070--Hb_010128_120 Hb_002742_070--Hb_011953_030 Hb_000997_410 Hb_000997_410 Hb_011953_030--Hb_000997_410 Hb_001040_120 Hb_001040_120 Hb_011953_030--Hb_001040_120 Hb_011953_030--Hb_002815_060 Hb_003436_050 Hb_003436_050 Hb_011953_030--Hb_003436_050 Hb_003814_030--Hb_000136_190 Hb_001508_020 Hb_001508_020 Hb_003814_030--Hb_001508_020 Hb_004657_090 Hb_004657_090 Hb_003814_030--Hb_004657_090 Hb_003814_030--Hb_005144_030 Hb_006508_030 Hb_006508_030 Hb_003814_030--Hb_006508_030 Hb_002044_170 Hb_002044_170 Hb_001031_040--Hb_002044_170 Hb_000197_290 Hb_000197_290 Hb_001031_040--Hb_000197_290 Hb_010417_060 Hb_010417_060 Hb_001031_040--Hb_010417_060 Hb_001301_090 Hb_001301_090 Hb_001031_040--Hb_001301_090 Hb_000286_170 Hb_000286_170 Hb_001031_040--Hb_000286_170 Hb_011671_230 Hb_011671_230 Hb_001031_040--Hb_011671_230 Hb_002370_040 Hb_002370_040 Hb_000136_190--Hb_002370_040 Hb_000062_060 Hb_000062_060 Hb_000136_190--Hb_000062_060 Hb_000136_190--Hb_001508_020 Hb_000136_190--Hb_004657_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.0462 12.2002 3.44287 12.072 15.9805 23.5252
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.09422 0.379001 0.626057 7.59347 6.80382

CAGE analysis