Hb_000331_020

Information

Type -
Description -
Location Contig331: 9814-11343
Sequence    

Annotation

kegg
ID rcu:RCOM_1506510
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_002511196.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9SMP5
description Cytochrome P450 94B3 OS=Arabidopsis thaliana GN=CYP94B3 PE=2 SV=1
trembl
ID B9RAH1
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1506510 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 94b3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000331_020 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_004586_050 0.0714143744 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
3 Hb_001398_110 0.0727106312 - - Early nodulin 55-2 precursor, putative [Ricinus communis]
4 Hb_000045_290 0.0819559992 - - -
5 Hb_004241_140 0.0899595466 - - S-locus lectin protein kinase family protein, putative [Theobroma cacao]
6 Hb_001117_020 0.0955626734 - - hypothetical protein CICLE_v10008579mg [Citrus clementina]
7 Hb_152528_010 0.1004639798 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
8 Hb_000654_060 0.1018020413 - - hypothetical protein CICLE_v10027550mg [Citrus clementina]
9 Hb_000256_170 0.1056751497 - - PREDICTED: uncharacterized protein LOC105638320 [Jatropha curcas]
10 Hb_005649_070 0.1069592596 - - conserved hypothetical protein [Ricinus communis]
11 Hb_019429_020 0.1075673155 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_000756_030 0.1082726194 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
13 Hb_006197_010 0.1214248289 transcription factor TF Family: MYB PREDICTED: myb-related protein Myb4-like [Jatropha curcas]
14 Hb_000371_030 0.1227375973 - - PREDICTED: LOW QUALITY PROTEIN: anthocyanidin 3-O-glucosyltransferase 5 [Prunus mume]
15 Hb_108744_010 0.1229201859 - - cinnamoyl-CoA reductase, putative [Ricinus communis]
16 Hb_022465_010 0.1251068724 - - hypothetical protein JCGZ_06012 [Jatropha curcas]
17 Hb_008821_030 0.1296797789 - - PREDICTED: glutamic acid-rich protein-like [Jatropha curcas]
18 Hb_002217_370 0.135933163 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105643685 [Jatropha curcas]
19 Hb_004788_030 0.1397516038 - - PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1 [Jatropha curcas]
20 Hb_002362_010 0.1409509288 - - hypothetical protein JCGZ_12328 [Jatropha curcas]

Gene co-expression network

sample Hb_000331_020 Hb_000331_020 Hb_004586_050 Hb_004586_050 Hb_000331_020--Hb_004586_050 Hb_001398_110 Hb_001398_110 Hb_000331_020--Hb_001398_110 Hb_000045_290 Hb_000045_290 Hb_000331_020--Hb_000045_290 Hb_004241_140 Hb_004241_140 Hb_000331_020--Hb_004241_140 Hb_001117_020 Hb_001117_020 Hb_000331_020--Hb_001117_020 Hb_152528_010 Hb_152528_010 Hb_000331_020--Hb_152528_010 Hb_004586_050--Hb_001398_110 Hb_004586_050--Hb_000045_290 Hb_004586_050--Hb_001117_020 Hb_019429_020 Hb_019429_020 Hb_004586_050--Hb_019429_020 Hb_004586_050--Hb_004241_140 Hb_001398_110--Hb_000045_290 Hb_001398_110--Hb_001117_020 Hb_001398_110--Hb_004241_140 Hb_001398_110--Hb_019429_020 Hb_005649_070 Hb_005649_070 Hb_001398_110--Hb_005649_070 Hb_000045_290--Hb_004241_140 Hb_000045_290--Hb_001117_020 Hb_000045_290--Hb_005649_070 Hb_000045_290--Hb_019429_020 Hb_008821_030 Hb_008821_030 Hb_000045_290--Hb_008821_030 Hb_004241_140--Hb_005649_070 Hb_004241_140--Hb_001117_020 Hb_055877_010 Hb_055877_010 Hb_004241_140--Hb_055877_010 Hb_004241_140--Hb_019429_020 Hb_001117_020--Hb_019429_020 Hb_001117_020--Hb_008821_030 Hb_004788_030 Hb_004788_030 Hb_001117_020--Hb_004788_030 Hb_000756_030 Hb_000756_030 Hb_152528_010--Hb_000756_030 Hb_108744_010 Hb_108744_010 Hb_152528_010--Hb_108744_010 Hb_000654_060 Hb_000654_060 Hb_152528_010--Hb_000654_060 Hb_152528_010--Hb_001398_110 Hb_022845_010 Hb_022845_010 Hb_152528_010--Hb_022845_010 Hb_152528_010--Hb_004241_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.30916 19.9671 9.15248 0 0.0133834
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0915784 0.024016 0.0451551 0.153338 0

CAGE analysis