Hb_000331_200

Information

Type -
Description -
Location Contig331: 191391-195163
Sequence    

Annotation

kegg
ID pop:POPTR_0012s09720g
description POPTRDRAFT_823409; hypothetical protein
nr
ID XP_012079870.1
description PREDICTED: adenylate kinase 4 [Jatropha curcas]
swissprot
ID Q08480
description Adenylate kinase 4 OS=Oryza sativa subsp. japonica GN=ADK-B PE=2 SV=1
trembl
ID A0A067KGH5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11320 PE=3 SV=1
Gene Ontology
ID GO:0004017
description adenylate kinase b

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34773: 183718-190589 , PASA_asmbl_34774: 191426-195162 , PASA_asmbl_34775: 194161-194617
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000331_200 0.0 - - PREDICTED: adenylate kinase 4 [Jatropha curcas]
2 Hb_001703_060 0.0429261453 - - protein kinase, putative [Ricinus communis]
3 Hb_000317_390 0.0647249637 - - PREDICTED: vesicle transport protein SFT2B [Jatropha curcas]
4 Hb_006693_020 0.0677437301 - - PREDICTED: frataxin, mitochondrial [Gossypium raimondii]
5 Hb_004108_070 0.0717415673 - - PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Jatropha curcas]
6 Hb_001140_370 0.0719015642 - - PREDICTED: uncharacterized protein LOC105648463 [Jatropha curcas]
7 Hb_000221_160 0.0722848847 - - PREDICTED: cytochrome c oxidase subunit 6b-1 [Jatropha curcas]
8 Hb_000703_350 0.0742034313 - - PREDICTED: WD repeat-containing protein 26-like [Jatropha curcas]
9 Hb_000081_160 0.074352018 - - PREDICTED: uncharacterized protein At4g17910 [Jatropha curcas]
10 Hb_152784_010 0.074451302 - - hypothetical protein PRUPE_ppa010913mg [Prunus persica]
11 Hb_118419_010 0.0765605379 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Jatropha curcas]
12 Hb_000030_030 0.0775711822 - - PREDICTED: ADP-glucose phosphorylase [Jatropha curcas]
13 Hb_002375_070 0.0803900129 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001427_160 0.080750463 - - o-methyltransferase, putative [Ricinus communis]
15 Hb_004696_080 0.0811808063 - - PREDICTED: uncharacterized protein At1g01500-like [Populus euphratica]
16 Hb_000599_250 0.0817008397 - - hypothetical protein POPTR_0002s03730g [Populus trichocarpa]
17 Hb_001252_130 0.0819366421 - - PREDICTED: protein YIPF1 homolog [Jatropha curcas]
18 Hb_001225_080 0.0822491919 - - PREDICTED: ADP-ribosylation factor-like protein 8A [Populus euphratica]
19 Hb_003605_090 0.0833368561 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105632419 [Jatropha curcas]
20 Hb_003918_010 0.0834955115 - - PREDICTED: biotin--protein ligase 2-like [Jatropha curcas]

Gene co-expression network

sample Hb_000331_200 Hb_000331_200 Hb_001703_060 Hb_001703_060 Hb_000331_200--Hb_001703_060 Hb_000317_390 Hb_000317_390 Hb_000331_200--Hb_000317_390 Hb_006693_020 Hb_006693_020 Hb_000331_200--Hb_006693_020 Hb_004108_070 Hb_004108_070 Hb_000331_200--Hb_004108_070 Hb_001140_370 Hb_001140_370 Hb_000331_200--Hb_001140_370 Hb_000221_160 Hb_000221_160 Hb_000331_200--Hb_000221_160 Hb_000030_030 Hb_000030_030 Hb_001703_060--Hb_000030_030 Hb_000510_300 Hb_000510_300 Hb_001703_060--Hb_000510_300 Hb_001427_160 Hb_001427_160 Hb_001703_060--Hb_001427_160 Hb_001225_080 Hb_001225_080 Hb_001703_060--Hb_001225_080 Hb_000081_160 Hb_000081_160 Hb_001703_060--Hb_000081_160 Hb_152784_010 Hb_152784_010 Hb_000317_390--Hb_152784_010 Hb_001318_250 Hb_001318_250 Hb_000317_390--Hb_001318_250 Hb_000045_310 Hb_000045_310 Hb_000317_390--Hb_000045_310 Hb_000317_390--Hb_004108_070 Hb_000317_390--Hb_006693_020 Hb_000390_300 Hb_000390_300 Hb_006693_020--Hb_000390_300 Hb_000431_170 Hb_000431_170 Hb_006693_020--Hb_000431_170 Hb_006693_020--Hb_004108_070 Hb_000465_390 Hb_000465_390 Hb_006693_020--Hb_000465_390 Hb_005731_050 Hb_005731_050 Hb_004108_070--Hb_005731_050 Hb_000815_320 Hb_000815_320 Hb_004108_070--Hb_000815_320 Hb_012286_030 Hb_012286_030 Hb_004108_070--Hb_012286_030 Hb_002375_070 Hb_002375_070 Hb_004108_070--Hb_002375_070 Hb_024071_020 Hb_024071_020 Hb_001140_370--Hb_024071_020 Hb_001016_030 Hb_001016_030 Hb_001140_370--Hb_001016_030 Hb_001157_020 Hb_001157_020 Hb_001140_370--Hb_001157_020 Hb_003918_010 Hb_003918_010 Hb_001140_370--Hb_003918_010 Hb_006059_050 Hb_006059_050 Hb_001140_370--Hb_006059_050 Hb_172426_040 Hb_172426_040 Hb_001140_370--Hb_172426_040 Hb_000221_160--Hb_003918_010 Hb_012053_070 Hb_012053_070 Hb_000221_160--Hb_012053_070 Hb_000270_370 Hb_000270_370 Hb_000221_160--Hb_000270_370 Hb_000363_360 Hb_000363_360 Hb_000221_160--Hb_000363_360 Hb_033594_150 Hb_033594_150 Hb_000221_160--Hb_033594_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.9552 16.2245 22.1497 43.1891 29.7614 25.7389
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
45.6106 47.4175 35.1923 21.5901 20.222

CAGE analysis