Hb_000331_210

Information

Type -
Description -
Location Contig331: 197135-201190
Sequence    

Annotation

kegg
ID pop:POPTR_0015s10480g
description POPTRDRAFT_835204; aspartyl aminopeptidase family protein
nr
ID XP_012079871.1
description PREDICTED: probable aspartyl aminopeptidase [Jatropha curcas]
swissprot
ID B9RAJ0
description Probable aspartyl aminopeptidase OS=Ricinus communis GN=RCOM_1506700 PE=2 SV=2
trembl
ID A0A067KFA5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11321 PE=3 SV=1
Gene Ontology
ID GO:0004177
description probable aspartyl aminopeptidase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34776: 197218-201160
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000331_210 0.0 - - PREDICTED: probable aspartyl aminopeptidase [Jatropha curcas]
2 Hb_009838_100 0.0717658461 - - hypothetical protein RCOM_1217340 [Ricinus communis]
3 Hb_000009_170 0.0822491486 - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase, putative [Ricinus communis]
4 Hb_000179_130 0.0996921175 - - PREDICTED: protein Brevis radix-like 4 [Jatropha curcas]
5 Hb_030116_020 0.1004335379 - - hypothetical protein POPTR_0016s13630g [Populus trichocarpa]
6 Hb_039837_010 0.1017525133 - - PREDICTED: probable RNA helicase SDE3 [Populus euphratica]
7 Hb_002811_360 0.1034349499 - - PREDICTED: GDP-mannose 3,5-epimerase 2 [Eucalyptus grandis]
8 Hb_004204_020 0.1039246234 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105640780 [Jatropha curcas]
9 Hb_021409_020 0.1040557459 - - PREDICTED: protein yippee-like At4g27745 [Malus domestica]
10 Hb_039946_020 0.1041607705 - - conserved hypothetical protein [Ricinus communis]
11 Hb_185830_020 0.1063540274 - - ABC transporter family protein [Hevea brasiliensis]
12 Hb_002196_020 0.1064931181 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
13 Hb_145314_010 0.107157145 - - PREDICTED: COP9 signalosome complex subunit 5b-like [Jatropha curcas]
14 Hb_004055_030 0.1074164429 - - casein kinase, putative [Ricinus communis]
15 Hb_000062_240 0.1074250227 - - PREDICTED: signal recognition particle subunit SRP72 [Jatropha curcas]
16 Hb_010931_120 0.1084631016 - - myosin heavy chain-related family protein [Populus trichocarpa]
17 Hb_106724_020 0.1098302254 - - PREDICTED: actin-related protein 2/3 complex subunit 1A-like isoform X1 [Populus euphratica]
18 Hb_002054_040 0.1110047574 - - PREDICTED: putative clathrin assembly protein At5g35200 [Jatropha curcas]
19 Hb_090804_010 0.1128650671 - - ATP-dependent RNA helicase, putative [Ricinus communis]
20 Hb_000630_050 0.1128651436 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000331_210 Hb_000331_210 Hb_009838_100 Hb_009838_100 Hb_000331_210--Hb_009838_100 Hb_000009_170 Hb_000009_170 Hb_000331_210--Hb_000009_170 Hb_000179_130 Hb_000179_130 Hb_000331_210--Hb_000179_130 Hb_030116_020 Hb_030116_020 Hb_000331_210--Hb_030116_020 Hb_039837_010 Hb_039837_010 Hb_000331_210--Hb_039837_010 Hb_002811_360 Hb_002811_360 Hb_000331_210--Hb_002811_360 Hb_009838_100--Hb_000179_130 Hb_009838_100--Hb_000009_170 Hb_000062_240 Hb_000062_240 Hb_009838_100--Hb_000062_240 Hb_082609_020 Hb_082609_020 Hb_009838_100--Hb_082609_020 Hb_000418_100 Hb_000418_100 Hb_009838_100--Hb_000418_100 Hb_001001_060 Hb_001001_060 Hb_000009_170--Hb_001001_060 Hb_000620_010 Hb_000620_010 Hb_000009_170--Hb_000620_010 Hb_000120_800 Hb_000120_800 Hb_000009_170--Hb_000120_800 Hb_022137_060 Hb_022137_060 Hb_000009_170--Hb_022137_060 Hb_002400_310 Hb_002400_310 Hb_000179_130--Hb_002400_310 Hb_000227_240 Hb_000227_240 Hb_000179_130--Hb_000227_240 Hb_000116_480 Hb_000116_480 Hb_000179_130--Hb_000116_480 Hb_000179_130--Hb_000062_240 Hb_003747_010 Hb_003747_010 Hb_030116_020--Hb_003747_010 Hb_001172_010 Hb_001172_010 Hb_030116_020--Hb_001172_010 Hb_000700_140 Hb_000700_140 Hb_030116_020--Hb_000700_140 Hb_000123_210 Hb_000123_210 Hb_030116_020--Hb_000123_210 Hb_033834_060 Hb_033834_060 Hb_030116_020--Hb_033834_060 Hb_106371_010 Hb_106371_010 Hb_030116_020--Hb_106371_010 Hb_039837_010--Hb_002811_360 Hb_003058_130 Hb_003058_130 Hb_039837_010--Hb_003058_130 Hb_009111_050 Hb_009111_050 Hb_039837_010--Hb_009111_050 Hb_001454_210 Hb_001454_210 Hb_039837_010--Hb_001454_210 Hb_028872_140 Hb_028872_140 Hb_039837_010--Hb_028872_140 Hb_000321_070 Hb_000321_070 Hb_039837_010--Hb_000321_070 Hb_004724_200 Hb_004724_200 Hb_002811_360--Hb_004724_200 Hb_002811_360--Hb_028872_140 Hb_002811_360--Hb_001454_210 Hb_002811_360--Hb_000062_240 Hb_001301_200 Hb_001301_200 Hb_002811_360--Hb_001301_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
41.941 14.4935 10.7222 24.897 29.7517 48.283
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
37.3712 18.6295 37.2567 34.8056 6.48014

CAGE analysis