Hb_000331_220

Information

Type -
Description -
Location Contig331: 204133-206928
Sequence    

Annotation

kegg
ID rcu:RCOM_1506810
description hypothetical protein
nr
ID XP_002511216.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID B9RAJ1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506810 PE=4 SV=1
Gene Ontology
ID GO:0004553
description o-fucosyltransferase family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34778: 204528-204892
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000331_220 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000112_040 0.072192572 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
3 Hb_071130_020 0.0860054004 - - -
4 Hb_002818_070 0.0873887633 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
5 Hb_001836_010 0.0999816112 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Jatropha curcas]
6 Hb_064293_010 0.1125408529 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
7 Hb_004994_200 0.1151681711 - - PREDICTED: uncharacterized protein LOC105174340 [Sesamum indicum]
8 Hb_000049_290 0.1189808987 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Jatropha curcas]
9 Hb_022487_010 0.1276361446 - - PREDICTED: disease resistance protein RPM1 [Jatropha curcas]
10 Hb_171168_010 0.1342135523 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
11 Hb_000680_020 0.1381283194 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
12 Hb_002211_020 0.1386086864 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 5-like [Jatropha curcas]
13 Hb_003683_200 0.1389945159 - - PREDICTED: putative phospholipid-transporting ATPase 9 [Jatropha curcas]
14 Hb_000574_340 0.1390581332 - - hypothetical protein RCOM_0901420 [Ricinus communis]
15 Hb_000363_050 0.1414091512 - - PREDICTED: zinc finger CCCH domain-containing protein 18-like isoform X2 [Jatropha curcas]
16 Hb_003643_080 0.1415295394 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
17 Hb_000009_390 0.142584101 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 2 isoform X2 [Jatropha curcas]
18 Hb_002871_170 0.1440045575 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
19 Hb_033153_040 0.1441039339 - - o-methyltransferase, putative [Ricinus communis]
20 Hb_004324_220 0.1480694309 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]

Gene co-expression network

sample Hb_000331_220 Hb_000331_220 Hb_000112_040 Hb_000112_040 Hb_000331_220--Hb_000112_040 Hb_071130_020 Hb_071130_020 Hb_000331_220--Hb_071130_020 Hb_002818_070 Hb_002818_070 Hb_000331_220--Hb_002818_070 Hb_001836_010 Hb_001836_010 Hb_000331_220--Hb_001836_010 Hb_064293_010 Hb_064293_010 Hb_000331_220--Hb_064293_010 Hb_004994_200 Hb_004994_200 Hb_000331_220--Hb_004994_200 Hb_002871_170 Hb_002871_170 Hb_000112_040--Hb_002871_170 Hb_171900_110 Hb_171900_110 Hb_000112_040--Hb_171900_110 Hb_000049_290 Hb_000049_290 Hb_000112_040--Hb_000049_290 Hb_000112_040--Hb_071130_020 Hb_000032_590 Hb_000032_590 Hb_000112_040--Hb_000032_590 Hb_000680_020 Hb_000680_020 Hb_071130_020--Hb_000680_020 Hb_001856_110 Hb_001856_110 Hb_071130_020--Hb_001856_110 Hb_071130_020--Hb_002818_070 Hb_000009_390 Hb_000009_390 Hb_071130_020--Hb_000009_390 Hb_003683_200 Hb_003683_200 Hb_071130_020--Hb_003683_200 Hb_002818_070--Hb_001836_010 Hb_002818_070--Hb_000009_390 Hb_003077_140 Hb_003077_140 Hb_002818_070--Hb_003077_140 Hb_002818_070--Hb_000680_020 Hb_001836_010--Hb_000009_390 Hb_007035_010 Hb_007035_010 Hb_001836_010--Hb_007035_010 Hb_001836_010--Hb_003683_200 Hb_006827_030 Hb_006827_030 Hb_001836_010--Hb_006827_030 Hb_033153_040 Hb_033153_040 Hb_064293_010--Hb_033153_040 Hb_002849_120 Hb_002849_120 Hb_064293_010--Hb_002849_120 Hb_064293_010--Hb_000049_290 Hb_004767_020 Hb_004767_020 Hb_064293_010--Hb_004767_020 Hb_000025_590 Hb_000025_590 Hb_064293_010--Hb_000025_590 Hb_000289_090 Hb_000289_090 Hb_004994_200--Hb_000289_090 Hb_004994_200--Hb_002818_070 Hb_000574_340 Hb_000574_340 Hb_004994_200--Hb_000574_340 Hb_012796_030 Hb_012796_030 Hb_004994_200--Hb_012796_030 Hb_004994_200--Hb_001836_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0935642 0.0493414 0.0234256 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0232483 0.12308

CAGE analysis