Hb_000331_700

Information

Type -
Description -
Location Contig331: 524038-528489
Sequence    

Annotation

kegg
ID pop:POPTR_0012s09250g
description POPTRDRAFT_570182; hypothetical protein
nr
ID XP_012079941.1
description PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K4E5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11378 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 011_C19.ab1: 527934-528499

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000331_700 0.0 - - PREDICTED: uncharacterized protein LOC105640277 [Jatropha curcas]
2 Hb_003044_090 0.0654083804 - - PREDICTED: fruit protein pKIWI502 [Jatropha curcas]
3 Hb_002811_080 0.0774698227 - - hypothetical protein POPTR_0001s08090g [Populus trichocarpa]
4 Hb_002588_010 0.0795773349 - - PREDICTED: transcription factor BTF3 homolog 4-like [Malus domestica]
5 Hb_000567_410 0.0812502887 - - hypothetical protein JCGZ_12784 [Jatropha curcas]
6 Hb_011311_010 0.0815465068 - - 60S ribosomal protein L27C [Hevea brasiliensis]
7 Hb_007497_030 0.0848295518 - - mutt domain protein, putative [Ricinus communis]
8 Hb_002006_130 0.085690584 - - PREDICTED: uncharacterized protein LOC105648712 [Jatropha curcas]
9 Hb_000881_080 0.0860237279 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000906_040 0.0866352585 - - PREDICTED: polynucleotide 5'-hydroxyl-kinase nol9 isoform X1 [Jatropha curcas]
11 Hb_005511_160 0.09064926 - - OB-fold nucleic acid binding domain-containing protein [Theobroma cacao]
12 Hb_002909_130 0.092169446 - - Uncharacterized protein isoform 1 [Theobroma cacao]
13 Hb_007944_040 0.0931935068 - - 60S ribosomal protein L18aB [Hevea brasiliensis]
14 Hb_001565_080 0.0941306154 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM17-2-like [Jatropha curcas]
15 Hb_001863_400 0.0943162374 - - hypothetical protein EUGRSUZ_F03302 [Eucalyptus grandis]
16 Hb_005063_050 0.0943211349 - - PREDICTED: probable prefoldin subunit 4 isoform X1 [Jatropha curcas]
17 Hb_003326_020 0.0950476361 - - PREDICTED: replication protein A 32 kDa subunit B [Jatropha curcas]
18 Hb_000349_290 0.095152313 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Jatropha curcas]
19 Hb_003893_050 0.0956584705 - - PREDICTED: SUMO-activating enzyme subunit 1B-1 isoform X1 [Jatropha curcas]
20 Hb_000975_320 0.0958326408 - - PREDICTED: uncharacterized protein LOC105628218 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_000331_700 Hb_000331_700 Hb_003044_090 Hb_003044_090 Hb_000331_700--Hb_003044_090 Hb_002811_080 Hb_002811_080 Hb_000331_700--Hb_002811_080 Hb_002588_010 Hb_002588_010 Hb_000331_700--Hb_002588_010 Hb_000567_410 Hb_000567_410 Hb_000331_700--Hb_000567_410 Hb_011311_010 Hb_011311_010 Hb_000331_700--Hb_011311_010 Hb_007497_030 Hb_007497_030 Hb_000331_700--Hb_007497_030 Hb_003044_090--Hb_002811_080 Hb_000975_320 Hb_000975_320 Hb_003044_090--Hb_000975_320 Hb_003044_090--Hb_011311_010 Hb_005511_160 Hb_005511_160 Hb_003044_090--Hb_005511_160 Hb_001565_080 Hb_001565_080 Hb_003044_090--Hb_001565_080 Hb_002811_080--Hb_000567_410 Hb_002811_080--Hb_000975_320 Hb_002811_080--Hb_002588_010 Hb_000330_070 Hb_000330_070 Hb_002811_080--Hb_000330_070 Hb_002811_080--Hb_011311_010 Hb_000042_260 Hb_000042_260 Hb_002588_010--Hb_000042_260 Hb_002588_010--Hb_011311_010 Hb_000093_110 Hb_000093_110 Hb_002588_010--Hb_000093_110 Hb_019516_100 Hb_019516_100 Hb_002588_010--Hb_019516_100 Hb_007944_040 Hb_007944_040 Hb_002588_010--Hb_007944_040 Hb_000111_340 Hb_000111_340 Hb_002588_010--Hb_000111_340 Hb_006478_160 Hb_006478_160 Hb_000567_410--Hb_006478_160 Hb_001085_270 Hb_001085_270 Hb_000567_410--Hb_001085_270 Hb_000567_410--Hb_000093_110 Hb_001085_120 Hb_001085_120 Hb_000567_410--Hb_001085_120 Hb_005063_050 Hb_005063_050 Hb_000567_410--Hb_005063_050 Hb_002660_030 Hb_002660_030 Hb_011311_010--Hb_002660_030 Hb_026398_010 Hb_026398_010 Hb_011311_010--Hb_026398_010 Hb_011311_010--Hb_007944_040 Hb_004724_160 Hb_004724_160 Hb_011311_010--Hb_004724_160 Hb_002925_030 Hb_002925_030 Hb_011311_010--Hb_002925_030 Hb_076626_010 Hb_076626_010 Hb_007497_030--Hb_076626_010 Hb_002909_130 Hb_002909_130 Hb_007497_030--Hb_002909_130 Hb_003549_020 Hb_003549_020 Hb_007497_030--Hb_003549_020 Hb_000258_280 Hb_000258_280 Hb_007497_030--Hb_000258_280 Hb_001863_400 Hb_001863_400 Hb_007497_030--Hb_001863_400
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.1845 13.0667 10.1888 12.2414 15.0119 17.1692
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
32.4957 93.3087 33.0637 12.5956 10.3902

CAGE analysis